Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02842 ATGTTGATGGATTTGAAATGGTTGTTTTCAATTCCAATCAGTGTTTCTTTTGCTTCAACATTGTTCACCCTATTGGCTATAGTAGGAGGCTGGTTGATATATCTGTATGGGCCGTATTGGAGGGTAAGGAAGGTTCCGGGCCCACCATCTCTGCCGCTGGTAGGACACCTTCCCTTGCTTGCTAAGTATGGCCCAGATATGTTCTCAATCCTTGCCAAGCAATATGGCCCAATCTACAGATTTCATATGGGAAGACAGCCCTTAATAATTGTAGCAGATGCAGAGCTTTGTAAAGAGGTTGGAATTAAAAAATTTAAAGACATTCCAAACAGAAGTACTCCCTCTCCCATTAAAGCTTCACCACTTCACCAAAAGGGTCTATTCTTCACCCGGGATACACAATGGTCTACTATGAGAAACACTATACTGTCGGTATACCAACCATCACACCTATCCAGATTAGTGCCAACAATGCAATCATTCATAGAATCTGCCACTCAAAATCTTGACTTTCAAAAACAAGATCTTGTCTTTTCTAATTTATCTCTTAAACTTGCAACCGACGTGATTGGACAAGCAGCCTTTGGTGTCAACTTCGGTCTTTCTAAGCCTCATTCGGATTCTAATGATATCAAGAGTGTTACTGTTAATAAGGACGACTTAATGAGTGCAAGTACTAGTAATGAAGTATCAGATTTCATCAATCAACACATATACTCAACAACTCAACTTAAGATGGATTTGTCAGGTTCCTTCTCCATCATACTTGGTTTACTTGTTCCAATACTTCAAGAACCATTTAGACAGATTTTGAAGAGAATACCGGGCACTATGGACTGGAAAATCGAGCGAACTAATAAGAAAATTAGTGGTCGTCTTGATGAGATTGTGGAAAACAGAATGAATGATAGGACGCGAAGTTCAAAGGATTTCTTGTCGCTTATACTAAACGCTAGAGAATCAAAAGCTGTTTCAGAAAATGTGTTCACACCTGAATACATCAGTGCTGTTACTTATGAACATTTGCTTGCTGGGTCAGCAACCACTTCTTTTACACTGTCTTGTGTTGTCTATTTGGTTGCTGGACATCCAGAAGTTGAGAAAAAGATGCTTGAAGAGATTGATGGGTTTGGTCCAATGGATAAGACACCTACTTCTCAAGATCTTCATGACAAGTTCCCTTATCTTGATCAAGTTAGTTAA 1203 0.394 MLMDLKWLFSIPISVSFASTLFTLLAIVGGWLIYLYGPYWRVRKVPGPPSLPLVGHLPLLAKYGPDMFSILAKQYGPIYRFHMGRQPLIIVADAELCKEVGIKKFKDIPNRSTPSPIKASPLHQKGLFFTRDTQWSTMRNTILSVYQPSHLSRLVPTMQSFIESATQNLDFQKQDLVFSNLSLKLATDVIGQAAFGVNFGLSKPHSDSNDIKSVTVNKDDLMSASTSNEVSDFINQHIYSTTQLKMDLSGSFSIILGLLVPILQEPFRQILKRIPGTMDWKIERTNKKISGRLDEIVENRMNDRTRSSKDFLSLILNARESKAVSENVFTPEYISAVTYEHLLAGSATTSFTLSCVVYLVAGHPEVEKKMLEEIDGFGPMDKTPTSQDLHDKFPYLDQVS 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02842 400 PANTHER THROMBOXANE-A SYNTHASE 14 399 - -
Car05g02842 400 Pfam Cytochrome P450 46 399 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car05g02842 400 Gene3D Cytochrome P450 35 400 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car05g02842 400 PANTHER CYTOCHROME P450 FAMILY PROTEIN 14 399 - -
Car05g02842 400 SUPERFAMILY Cytochrome P450 39 399 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car05g02842 400 PRINTS E-class P450 group I signature 353 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car05g02842 400 PRINTS E-class P450 group I signature 333 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car05g02842 400 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02842 Car-Chr5 73466815 73471771 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02842 83 399 Cytochrome P450 AT2G26170 69.401 2.41e-144 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02842 K20771 - gmx:100797803 662.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02842 05 73466815 73471771 Car05g02842 05 73466815 73471771 ECH
Car04g03291 04 61414765 61418340 Car05g02842 05 73466815 73471771 PCT