Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02821 ATGATCAAAATTCCACCAAACCTTCAAATTCCTCATTGGGACGCAACACAAAACCACGAGTGTTTCATTTCAAACGACTCAGAAATACACATTTCCAGCACCGAAGTTTTCTCCACGGATCAATTCCGAATGTTCGAATTCAAAGTTAGAAAATGCCAGCGTGGCAGGGCCCACGACTGGACAGAATGTCCCTACACCCATCCCGGCGAAAAAGCCCGCCGGAGAGACCCTCTAAAATATAATTACTCCGCCACTCCATGCTCGGAGTTTCGCAAAGATAACTGCATCAAAGGTGATTCTTGCCACTTGGCTCACGGCGTCTTCGAATGTTGGCTCCATCCTTCTCGTTACAGGACTCAGCTTTGCAACGACGGAATCTCTTGCCGGCGACGAGTTTGTTTCTTTGCTCACACTGTTGATCAACTCCGTAACGCTTCGCCTGAATCAGTTGTTTCATCTCCTACTTCGGTTCTTAACGCTTCGCTGATCCCCGATTCTCCACAGGGAAATTCCCGATACGGCGTCGTTCCGGTAAGCGCGAGGGAATTAGTTGGATTAATGCGCAATGTTCAATTTGAGGATTCGGGTCGGGTATCGCAGATGGGTTGTGTATTCGGGTCTCCGCGAGGTGGGTTTTTGAGTGTTCCATCAAGCCATGAAGGAGTTGCTATGGAGAGAGTGGAATCGGGAAGAGATCTTAGAGCGAAAATCTATGGGAAATTCAGTAGGGTGAGCTCCAATGATGCTATTCCTGATATTGGATGGGTTTCGGAATTGGTTATGTGA 786 0.4784 MIKIPPNLQIPHWDATQNHECFISNDSEIHISSTEVFSTDQFRMFEFKVRKCQRGRAHDWTECPYTHPGEKARRRDPLKYNYSATPCSEFRKDNCIKGDSCHLAHGVFECWLHPSRYRTQLCNDGISCRRRVCFFAHTVDQLRNASPESVVSSPTSVLNASLIPDSPQGNSRYGVVPVSARELVGLMRNVQFEDSGRVSQMGCVFGSPRGGFLSVPSSHEGVAMERVESGRDLRAKIYGKFSRVSSNDAIPDIGWVSELVM 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02821 261 Gene3D - 78 152 - -
Car05g02821 261 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 20 31 260 - -
Car05g02821 261 SMART c3hfinal6 116 139 IPR000571 GO:0046872
Car05g02821 261 SMART c3hfinal6 81 107 IPR000571 GO:0046872
Car05g02821 261 ProSiteProfiles Zinc finger C3H1-type profile. 81 108 IPR000571 GO:0046872
Car05g02821 261 PANTHER UNKEMPT FAMILY MEMBER 31 260 IPR045234 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02821 Car-Chr5 73287817 73289215 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02821 36 179 C2H2 Transcription Factor Family AT5G12850 51.572 3.16e-52 179
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02821 05 73287817 73289215 Car05g02821 05 73287817 73289215 ECH