Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02803 ATGGACGACGCCTTTGGTAGATCTATTCCCGAGGTCCTTGATTTCTTTGGAGTGGACCCAATAAAGGGTTTATCAGACACACAGGTGGTACAACATGGTAGACTTTATGGTACAAATGTGCTGCATGAAGATCAAAGAGCTCCGTTTTGGAAATTGGTTTTGAAGCAATTTGATGATTTGCTTGTAAAGATACTAATAGCAGCCGCTCTTATATCATTTATTCTGGCATTAATTAATGGCGAAACAGGCTTGATGGCATTTCTGGAGCCTTCTGTTATTCTGATGATATTGGCTGCCAATGCAGCTGTGGGAGTGATCACAGAAACAAATGCTGAAAAAGCTCTTGAGGAGCTACGTGCCTATCAAGCTGATGTGGCAACTGTCTTGCGAAATGGTTGTTTTTCGATACTTCCTGCAACTGAACTTGTTCCTGGGGATATTGTGGAAGTTTCTGGTGAGCTGATGATTGAGATGCTAAGTAATGAAGTACGTGTTGATCAAGCTATTCTTACAGGTGAGAGCAGCTCGGTGGAGAAAGAGCTTAAAACTACCACAGCAACAAATGCGGTATACCAGGACAAAACAAATATTCTGTTCTCGGGAACAGTTGTGGTTGCTGGTAGGGCAAGAGCTGTGGTGGTCGGAGTTGGTCCTAACACTGCCATGGGCAGCATTCGTGATTCAATGTTGCGGACAGAGGATGAGGTGACACCATTGAAAAAGAAACTGGACGAGTTTGGCACTTTTTTGGCCAAGGTTATTGCAGGGATATGCGTGTTGGTTTGGATTGTAAATATTGGTCACTTTCGTGACCCTTCTCATGGTGGTTTTGTGCATGGGGCAATTCATTATTTTAAGATTGCAGTTGCTCTGGCAGTTGCAGCAATTCCTGAAGGACTCCCTGCTGTTGTAACAACGTGTTTGGCTCTTGGAACAAAGCGAATGGCTAGGTTGAACGCCATTGTTCGATCTCTGCCATCCGTTGAGACCTTGGGCTGTACTACTGTAATTTGCAGTGACAAAACTGGGACTCTAACTACCAATATGATGTCAGTTGCGAAGATATGTGTTGTTGAATCTGCAAAAAGTAGTCCTTTTGTTACTGAATATGGTGTCAGTGGAACTACATATGCACCTGAAGGTATAATCTTTGACAAGGCAGGGGTGCAGCTTGATATTCCAGCTCAATTGCAATGTCTTCTTCACTTGGCAATGTGCTCTGCTCTTTGCAATGAATCAACCCTGCAGTATAATCCTGATAAAGGGAAGTATGAAAAAATTGGTGAGTCAACCGAAGTAGCACTACGTGTTTTGGTAGAAAAGGTCGGTCTCCCGGGTTTTAATTCAATGCCGTCAGCATTGAATATGTTGAGCAAGCATGAACGTGCTTCTTACTGTAACCACTATTGGGAGGAACAATTTAGAAAGTTAGATGTTTTGGAATTTTCTCGAGATCGGAAAATGATGAGTATCCTTTGCAGCCGGAACCAGTTGCATGTTTTATTCTCAAAGGGTGCTCCAGAAAGTATAATCTCTAAATGTACAACCATTCTATGCAATGATGATGGTTCTGTTGTGCCACTTACTGCTGATATTCGAGCAGAGCTAGACTCAAAGTTCCACAGTTTTGCAGGAAAAGAAACATTGAGATGCCTAGCTTTGGCCCTCAAATGGATGCCCTCAGTTCAACAGACATTGTCCTTTGATGATGAGAAAGATCTCACATTTATTGGATTGGTTGGGATGTTGGATCCACCAAGAGATGAAGTAAGAAATGCCATGCTTTCATGTATGACTGCTGGCATACGTGTTATTGTCGTCACTGGAGATAACAAGTCCACTGCCGAGTCACTTTGCCGCAAGATAGGTGCTTTTGACCATTTGATAGATTTTACTGAACATTCTTACACTGCTTCTGAGTTCGAAGAACTTCCAGCACTGCAACAAACTATTGCTTTGCAGCGTATGGCACTTTTTACCAGGGTCGAGCCTTCTCATAAAAGGATGCTGGTTGAAGCATTGCAGAATCAGAATGAAGTGGTTGCAATGACTGGTGATGGAGTCAATGATGCACCTGCCCTAAAGAAGGCAGATATAGGAATTGCTATGGGTTCAGGGACTGCTGTTGCTAAGAGTGCTTCAGACATGGTCCTGGCTGATGACAACTTTGCCTCAATCGTTGCGGCCGTGGCAGAGGGAAGGGCTATATACAATAACACAAAGCAGTTTATTAGATACATGATTTCTTCCAACATTGGTGAAGTAGTATGTATATTTGTGGCTGCTGTGCTTGGAATACCTGACACCCTGGCCCCTGTCCAGTTACTTTGGGTCAATTTGGTTACTGATGGATTGCCTGCAACTGCTATTGGCTTCAATAAGCAAGACTCTGATGTGATGAAGGTTAAGCCTCGAAAGGTGAATGAAGCAGTCGTTACAGGTTGGCTCTTCTTTCGGTATTTGGTAATTGGAGCTTATGTTGGCCTTGCCACTGTTGCTGGTTTTATTTGGTGGTTTGTTTACGCTGATAGTGGCCCACAACTGCCATACACTGAATTGATGAATTTTGACACTTGCCCGACCAGGGAGACAACTTATTCATGCAGTATATTTGAAGATCGACATCCATCAACTGTATCAATGACTGTGCTTGTAGTTGTTGAGATGTTCAATGCTTTGAACAATCTTAGTGAAAATCAATCCCTCCTGGTCATCCCTCCTTGGAGTAACTTGTGGCTTGTTGCTTCTATTGTCCTTACTATGCTTCTTCACATACTAATTTTGTATGTTCGCCCACTGTCAGTTCTTTTCTCTGTAACACCATTATCTTGGGCTGACTGGATGGCTGTCCTTTATCTTTCTCTACCGGTTATAATCATTGATGAGATTTTAAAGTTCTTCTCCAGAAATCCTAATG 2917 0.4278 MDDAFGRSIPEVLDFFGVDPIKGLSDTQVVQHGRLYGTNVLHEDQRAPFWKLVLKQFDDLLVKILIAAALISFILALINGETGLMAFLEPSVILMILAANAAVGVITETNAEKALEELRAYQADVATVLRNGCFSILPATELVPGDIVEVSGELMIEMLSNEVRVDQAILTGESSSVEKELKTTTATNAVYQDKTNILFSGTVVVAGRARAVVVGVGPNTAMGSIRDSMLRTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFVHGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVESAKSSPFVTEYGVSGTTYAPEGIIFDKAGVQLDIPAQLQCLLHLAMCSALCNESTLQYNPDKGKYEKIGESTEVALRVLVEKVGLPGFNSMPSALNMLSKHERASYCNHYWEEQFRKLDVLEFSRDRKMMSILCSRNQLHVLFSKGAPESIISKCTTILCNDDGSVVPLTADIRAELDSKFHSFAGKETLRCLALALKWMPSVQQTLSFDDEKDLTFIGLVGMLDPPRDEVRNAMLSCMTAGIRVIVVTGDNKSTAESLCRKIGAFDHLIDFTEHSYTASEFEELPALQQTIALQRMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFASIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPVQLLWVNLVTDGLPATAIGFNKQDSDVMKVKPRKVNEAVVTGWLFFRYLVIGAYVGLATVAGFIWWFVYADSGPQLPYTELMNFDTCPTRETTYSCSIFEDRHPSTVSMTVLVVVEMFNALNNLSENQSLLVIPPWSNLWLVASIVLTMLLHILILYVRPLSVLFSVTPLSWADWMAVLYLSLPVIIIDEILKFFSRNPN 972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02803 972 Gene3D - 55 969 - -
Car05g02803 972 SFLD C1.7: P-type atpase like 319 736 - -
Car05g02803 972 SMART Cation_ATPase_N_a_2 3 77 IPR004014 -
Car05g02803 972 CDD P-type_ATPase_SERCA 5 969 - -
Car05g02803 972 ProSitePatterns E1-E2 ATPases phosphorylation site. 340 346 IPR018303 -
Car05g02803 972 Coils Coil 111 131 - -
Car05g02803 972 PANTHER CALCIUM-TRANSPORTING ATPASE 7 970 - -
Car05g02803 972 Pfam E1-E2 ATPase 122 317 - -
Car05g02803 972 SFLD p-type atpase 319 736 IPR044492 -
Car05g02803 972 PRINTS P-type cation-transporting ATPase superfamily signature 166 180 - -
Car05g02803 972 PRINTS P-type cation-transporting ATPase superfamily signature 684 703 - -
Car05g02803 972 PRINTS P-type cation-transporting ATPase superfamily signature 338 352 - -
Car05g02803 972 PRINTS P-type cation-transporting ATPase superfamily signature 578 589 - -
Car05g02803 972 PRINTS P-type cation-transporting ATPase superfamily signature 600 610 - -
Car05g02803 972 PRINTS P-type cation-transporting ATPase superfamily signature 707 719 - -
Car05g02803 972 PANTHER SARCOPLASMIC/ENDOPLASMIC RETICULUM CALCIUM ATPASE 3 7 970 - -
Car05g02803 972 Pfam haloacid dehalogenase-like hydrolase 575 698 - -
Car05g02803 972 Gene3D - 335 728 IPR023214 -
Car05g02803 972 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 92 364 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Car05g02803 972 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 654 769 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Car05g02803 972 Pfam Cation transport ATPase (P-type) 408 517 - -
Car05g02803 972 TIGRFAM ATPase-IIA1_Ca: calcium-translocating P-type ATPase, SERCA-type 53 840 IPR005782 GO:0005388|GO:0006816|GO:0016021
Car05g02803 972 Gene3D - 22 230 - -
Car05g02803 972 Pfam Cation transporter/ATPase, N-terminus 9 72 IPR004014 -
Car05g02803 972 Pfam Cation transporting ATPase, C-terminus 768 967 IPR006068 -
Car05g02803 972 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 345 582 IPR023299 GO:0000166
Car05g02803 972 SUPERFAMILY HAD-like 571 732 IPR036412 -
Car05g02803 972 SUPERFAMILY Calcium ATPase, transmembrane domain M 4 969 IPR023298 -
Car05g02803 972 Gene3D - 348 585 IPR023299 GO:0000166
Car05g02803 972 SUPERFAMILY Calcium ATPase, transduction domain A 124 228 IPR008250 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02803 Car-Chr5 73067321 73094142 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02803 1 970 Primary Pumps ATPases(2) AT1G10130 83.930 0.0 1672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02803 K05853 - gmx:100783509 1767.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02803 05 73067321 73094142 Car05g02803 05 73067321 73094142 ECH