Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02795 ATGGATTCACGTTCATCACCTCCTGATATCAACATTAAACCTGAGCATTGTCCAGAAGCTGTGATTGAATGGTACCGTGTAACGAGTTTAAAAGATCGTAAAGAAAGTGCTAGTAGAAAGGATTTGGCTTTGAAAGCAAAACAACATCTTCTTTCTTTGGGTTGGAAGTTTTGGTATATTGATAAAAAAGTTAGGTGGGAATTGCGTTATACTTCTCCTACTAATGGTAAACACTATATTTCTTTAAAAACGGCTTGTGAGAGTTGCATTGAAGAAGGAGGTTGTAGTGGCAAACAGCCTTCAACCGCACTGGCAACTGTCATTTCTTTGTCTCCGTCACAGCCGAAGAAGCGACCGAGACAATTCGAGGAAACCAATGATTCGACTTCTGAGGAGGATTCTGAATATAAAGCTACATCGAGTACGGTTTCAAATTGGAAGGAATCAAAGGAAAAAGAGAAAAATGTGATTCAATCTGAACCAGAGGTTACTACTAATTCAGTTGGTTTTGGTAAAAGAGGGAAGGTATTTAAGAAGGGTGCAAAGGAGAAGAATTTAGAGGGATGTGATAAAAGAGGGAAAGCATTCAAGATGAATAATTCAAAGGGTTCTGGTAAAAGAGGGAAAGTATTAAAGATGAGTGTGAGGGAAAGGTATACTCTTGTTTCTTGGTTGATAAGTCACCGAGTTTTGGCTTCAGGGACTAATGTGTTATGTCGTGGTAGTAACAATGTGGTAAAACAAGGGAGGCTTTCTAATGATGGTATAATTTGTGATTGTTGCGACGTGATTTTCACTGTCACTGGATTTGAGGCTCACGCCGGTTGTACAAGACATAGACCATCCACGAGTATCTGCTTGGAGGATGGAAGATCGTTATCGCAATGTCAAAGGGAAGCTCTGAATTTGCGTAATCCCAAGGGGGATCATTTTTTGAGTGATGAAAAGTCTGATGAAACTAACGACAATGTTTGTGCTATTTGTGGTTTTGGAGGTGACATAGTACTGTGCGATCGATGTCCTTCTTCGTTTCACCTAATCTGTTTAGGTTTTGATCGAGTCCCCGACGGTGATTGGTTTTGTCCGTCATGTAGCTGTAAAATATGCTATCGACCGAGATGCAAAGAAGAATGTGCAAATCATGCTGATAACAATGTTCTTGTTTGTGTTCAATGTGAGCAAAAATATCACTTTGGGTGCGTAAATGCTACCGGATTTAGTTCTTGTCACTCGGACAGCAATGCTAAAAAGAAGAATTGGTTTTGCAGTGTAGTTTGTGGGAACATGTTTTTATGTCTACAAAGGCTGATAGGGAAACCGATTTCGGTTGGTGATAATCTAACTTGGACATTGTTGAAGAATGTGAGTAGTGTTGATGATGTTGGAAATTTTACTTTTGATGAGTTTGGTCCAAAGGAGAGTAAGTTGAATGCGGCACTTGGTGTATTGTATGACACTTTTACCCCAACTATTGATGCTATAACAGGAAGAGAATTGATTAAAGATATTGTTTTTAGTAGAGATTCAGAACATGTTCGCTTGAACTTTAGTGGTTTCTATAATGTGGTTTTAGAGAAAATGGGTGAAATGATTTCAGTAGCTACTATAAGGATTTATGGCAAAAAGGTTGCAGAGGTAGTTTTCGTGGCCACCAAGGAACAATATCGAAACAAAGGAATGTGTCGTTCATTGATGAATGAGCTTGAGGAACAGTTAAGTCTACTAGGAGTAAAGAGCATACTTTTGCACTCATCCCATGAGGCTATTGAGACTTGGACAAAATCTTTTGGTTTTGCTAGAATAACTGCTAAAGAAAGGCGTCAATATATTGACAATACTTTTTTAGAATTTCAGAACACTATCATGTGCTTTAAACCACTGAATAGACCTATATGGTCTTGCATTGCTGGACGATAG 1917 0.3871 MDSRSSPPDINIKPEHCPEAVIEWYRVTSLKDRKESASRKDLALKAKQHLLSLGWKFWYIDKKVRWELRYTSPTNGKHYISLKTACESCIEEGGCSGKQPSTALATVISLSPSQPKKRPRQFEETNDSTSEEDSEYKATSSTVSNWKESKEKEKNVIQSEPEVTTNSVGFGKRGKVFKKGAKEKNLEGCDKRGKAFKMNNSKGSGKRGKVLKMSVRERYTLVSWLISHRVLASGTNVLCRGSNNVVKQGRLSNDGIICDCCDVIFTVTGFEAHAGCTRHRPSTSICLEDGRSLSQCQREALNLRNPKGDHFLSDEKSDETNDNVCAICGFGGDIVLCDRCPSSFHLICLGFDRVPDGDWFCPSCSCKICYRPRCKEECANHADNNVLVCVQCEQKYHFGCVNATGFSSCHSDSNAKKKNWFCSVVCGNMFLCLQRLIGKPISVGDNLTWTLLKNVSSVDDVGNFTFDEFGPKESKLNAALGVLYDTFTPTIDAITGRELIKDIVFSRDSEHVRLNFSGFYNVVLEKMGEMISVATIRIYGKKVAEVVFVATKEQYRNKGMCRSLMNELEEQLSLLGVKSILLHSSHEAIETWTKSFGFARITAKERRQYIDNTFLEFQNTIMCFKPLNRPIWSCIAGR 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02795 638 Gene3D - 472 623 - -
Car05g02795 638 Pfam Tify domain binding domain 249 300 IPR032308 -
Car05g02795 638 Pfam PHD-finger 324 367 IPR019787 -
Car05g02795 638 ProSiteProfiles Zinc finger PHD-type profile. 322 367 IPR019787 -
Car05g02795 638 PANTHER DUF724 DOMAIN-CONTAINING PROTEIN 4-RELATED 8 630 - -
Car05g02795 638 MobiDBLite consensus disorder prediction 117 134 - -
Car05g02795 638 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 8 630 - -
Car05g02795 638 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 516 613 IPR016181 -
Car05g02795 638 CDD NAT_SF 522 583 - -
Car05g02795 638 MobiDBLite consensus disorder prediction 111 162 - -
Car05g02795 638 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 312 386 IPR013083 -
Car05g02795 638 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 482 621 IPR000182 GO:0016407
Car05g02795 638 Pfam Acetyltransferase (GNAT) family 503 598 IPR000182 GO:0016407
Car05g02795 638 SUPERFAMILY FYVE/PHD zinc finger 309 366 IPR011011 -
Car05g02795 638 SMART PHD_3 324 365 IPR001965 -
Car05g02795 638 SMART PHD_3 373 426 IPR001965 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02795 Car-Chr5 73018258 73020174 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02795 42 575 PHD Transcription Factor Family AT5G58610 32.504 5.41e-85 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Car05g02795 Acetyltransf_1 1.3e-09 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02795 - - cam:101509959 1297.34