Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02793 ATGGATGATCTTTTGTGTAAAGAAAAAGAAACGGTCTTGGAAGTAGAAGTGAGAAATGAAGAATACCAATTGAATCAATCACACCAAGAATTTGATGTTTCAGAAGAGGAACATGTGGGTGTGATGATTGAGAGAGAGATCGTTCTTGGGTTCAAAAAAGATGAAAACTTGGTGTTTGATGACTGGTTGAAACGTGCTCGTTTGAATGCAATCAATTGGATTCTCAAAACAAGAGCAGCATTGGGTTTTGGCTTTCAAACAGCTTATTTATCAGTGACATATTTGGATCGATTTCTTTCAAAGCGTTCCATTCATGGTGAGAATCATTGGGCAATTCGGTTGTTATCAATTGCATGTCTTTCTCTGGCTGCAAAAATGGAAGAGTGTAATGTGCCAGGGTTATCAGACTTTCAATTGGAAGATTATTTTTTTGATGGAAAAGTGATTCAAAGAATGGAGCTTTTGGTGCTTAGTACATTGGAATGGAACATGAGTATAATCACTCCCTTTGCGTTTCTTTCTTATTTCATCAAAAAGTTCTGCAATGAATCACCAACAAGTTCTGTTGTTTCCAACACAATGCAAAGAATCTTCACTGTAATAATGGAAGaggttaatttgatggatcacaaaccatctgttgttgcagcagctgctacttttgtggcattggatcaacaattgaccatagaagatgtgaggttaaAAATGAATTCAATTTCTCAACATCCATTACTTGAAGCAAATGATGTATTTGCTTTCTACAATCTAATTCAAAGATTATATGAGGAGAAGATTAAAAGAGTAGAACTTTTATATACACCGAATTCTTCAGTTATTCGATCCAGACCTATTCACTATGCTGTTGCTATGACAaagagaagaagactctcattcattgatgatgaagatggtggtgacaaGAAGGGACCACACCAAGAAAATCCCAAAATTTGA 957 0.3009 MDDLLCKEKETVLEVEVRNEEYQLNQSHQEFDVSEEEHVGVMIEREIVLGFKKDENLVFDDWLKRARLNAINWILKTRAALGFGFQTAYLSVTYLDRFLSKRSIHGENHWAIRLLSIACLSLAAKMEECNVPGLSDFQLEDYFFDGKVIQRMELLVLSTLEWNMSIITPFAFLSYFIKKFCNESPTSSVVSNTMQRIFTVIMEEVNLMDHKPSVVAAAATFVALDQQLTIEDVRLKMNSISQHPLLEANDVFAFYNLIQRLYEEKIKRVELLYTPNSSVIRSRPIHYAVAMTKRRRLSFIDDEDGGDKKGPHQENPKI 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02793 318 Pfam Cyclin, C-terminal domain 167 262 IPR004367 -
Car05g02793 318 SUPERFAMILY Cyclin-like 150 241 IPR036915 -
Car05g02793 318 SUPERFAMILY Cyclin-like 28 164 IPR036915 -
Car05g02793 318 Gene3D - 160 270 - -
Car05g02793 318 CDD CYCLIN 67 157 IPR013763 -
Car05g02793 318 Pfam Cyclin, N-terminal domain 64 165 IPR006671 -
Car05g02793 318 PANTHER CYCLIN-D5-1 38 296 - -
Car05g02793 318 PANTHER CYCLINS 38 296 IPR039361 -
Car05g02793 318 Gene3D - 60 159 - -
Car05g02793 318 SMART cyclin_7 72 158 IPR013763 -
Car05g02793 318 ProSitePatterns Cyclins signature. 67 98 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02793 Car-Chr5 72986221 72988009 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02793 4 241 Core Cell Cycle Gene Families AT4G37630 37.402 3.02e-40 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02793 K18811 - gmx:100780266 393.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02793 05 72986221 72988009 Car05g02793 05 72986221 72988009 ECH