Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02788 ATGCAATCAAGTAGTAGTAGGCTTTTGTTGTGTTCCTCAAAACCAAATTCATTGTTTGGTTCAGCCGTCACTCCCACTCTCCCCTCTTCTCTTAGATTCCCACCACTCTCCCTTACCATCCCTAACTCTACCTCATCCTCTATTCGCTTACGATCCCTCCGCTCCTCCGCGAGTGACTCTTCTCAAGTTACAGAAATGGCTTCTCAAGATCAAGACCCACGTATAGCCAGAATCTCATCTGCGATCCGTGTCATCCCCGATTTTCCTAAGCCAGGTATCATGTTTCAAGATATAACCACACTACTTCTGGATACAAAGGCTTTCAAAGATACCATTGACTTGTTTGTTGAGAGGTATAGAGATCAAAACATTTCTGTTGTCGCAGGTGTTGAAGCCAGAGGCTTTATTTTTGGGCCACCCATTGCATTGGCAATTGGAGCAAAATTTGTCCCAATGAGGAAACCCAAGAAATTGCCAGGAGAGGTAATCTCAGAAGAGTATTCTTTGGAGTATGGAACTGACAAAATAGAAATGCACGTAGGGGCTGTACAACCTGGAGAAAGAGCCTTAGTCATTGATGATCTTATAGCCACCGGTGGAACCCTATGTGCTGCGATTAAACTGCTAGAACGTGTTGAGGTGACTGTTGTTGAGTGCGCTTGTGTGATTGAATTACCGGAGTTAAAGGGGAGAGAAAGGCTGGGAGACAGGTCGTTGTTCGTCTTAGTTGAAGCAGAAGGAGCTTGA 747 0.4498 MQSSSSRLLLCSSKPNSLFGSAVTPTLPSSLRFPPLSLTIPNSTSSSIRLRSLRSSASDSSQVTEMASQDQDPRIARISSAIRVIPDFPKPGIMFQDITTLLLDTKAFKDTIDLFVERYRDQNISVVAGVEARGFIFGPPIALAIGAKFVPMRKPKKLPGEVISEEYSLEYGTDKIEMHVGAVQPGERALVIDDLIATGGTLCAAIKLLERVEVTVVECACVIELPELKGRERLGDRSLFVLVEAEGA 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02788 248 SUPERFAMILY PRTase-like 80 238 IPR029057 -
Car05g02788 248 Gene3D - 65 247 IPR029057 -
Car05g02788 248 Hamap Adenine phosphoribosyltransferase [apt]. 78 245 IPR005764 GO:0003999|GO:0005737|GO:0006168
Car05g02788 248 Pfam Phosphoribosyl transferase domain 104 240 IPR000836 -
Car05g02788 248 CDD PRTases_typeI 112 244 IPR000836 -
Car05g02788 248 PANTHER BNAA09G27900D PROTEIN 69 246 - -
Car05g02788 248 TIGRFAM apt: adenine phosphoribosyltransferase 79 244 IPR005764 GO:0003999|GO:0005737|GO:0006168
Car05g02788 248 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 69 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02788 Car-Chr5 72946426 72950141 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02788 66 245 PRT Gene Family AT1G27450 84.530 1.24e-111 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02788 K00759 - gmx:100305792 325.479
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02788 05 72946426 72950141 Car05g02788 05 72946426 72950141 ECH