Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02772 ATGGTGGAGACTCGCGCCTCAAAGAGAAAAACTAATGCAACCCAAAATCAAAACCAACCTCACAAGAAGAAACGCGTCGTGTTGGGTGAACTTCCCAATTCAACCAACGCCATTGTTCCTCATACTCAAACACACGATTCAAAAAACCTCAAAAACCAAAAACACAAGAAATCAAACACACATGACAATGTCGATGGCCCAGTTGTTTCCGAAGTTTACAAGCATCTTCGCAAAACAGAGATGGAGAAAAAGAGAAGACCAATGAAGGATTACATGGAGATTGTTCAGAGAGATATTACATCAAACATGAGAGGGATATTGGTGGATTGGTTAGTTGAAGTTGCTGAAGAATACAAGCTTCTTTCAGATACCCTTCATCTCGCTGTTTCATACATTGATAGATTTTTATCTCTTAACCGTATCAGCAGAATCAAGCTTCAATTGTTGGGTGTTTCTGCCATGCTCATTGCATCGAAGTATGAAGAAATTAGTCCTCCCCATGTGGAAGAGTTCTGCTTCATTACTGATAATACATATGACAAGGACGAGGTTTTAGAGATGGAAACTGACATACTCAAGGCACTAGATTTTGAAATGGGCAACCCAACTGTTAAAACTTTTCTAAGGCGGTTTCATGGAATTGCCTGTGAGAAAAAAAATGCTTCAAGTTTGCAGTTTGAGTTCTTGACTTACTATCTTGCTGAGCTTAGTTTATTGGATTATCATTGTTTGAGATTTTTGCCTTCTTTGATGGCTGCATCTGTTATATTTCTTGCTAGATTCATTGTTTGGCCTAAAACTTGCACTTGGACATCAGCCCTGCAAGAATACACTGCGTATAAACCAATAGAGTTGAAAGAATGTGTTCTCTTCTTACATGATTTATATATGGCTAGAAGGGGAGAGTCATTTGAAGCTACTAGAGAGAAATACAATCAGCATAAGTTTAAATATGTAGCAAATTTTCCTTCGCCTCCTCATTTACCAAGTCATCTGTTCAAAGCAGAGTGA 1011 0.3838 MVETRASKRKTNATQNQNQPHKKKRVVLGELPNSTNAIVPHTQTHDSKNLKNQKHKKSNTHDNVDGPVVSEVYKHLRKTEMEKKRRPMKDYMEIVQRDITSNMRGILVDWLVEVAEEYKLLSDTLHLAVSYIDRFLSLNRISRIKLQLLGVSAMLIASKYEEISPPHVEEFCFITDNTYDKDEVLEMETDILKALDFEMGNPTVKTFLRRFHGIACEKKNASSLQFEFLTYYLAELSLLDYHCLRFLPSLMAASVIFLARFIVWPKTCTWTSALQEYTAYKPIELKECVLFLHDLYMARRGESFEATREKYNQHKFKYVANFPSPPHLPSHLFKAE 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02772 336 CDD CYCLIN 103 192 IPR013763 -
Car05g02772 336 SUPERFAMILY Cyclin-like 68 199 IPR036915 -
Car05g02772 336 CDD CYCLIN 202 293 IPR013763 -
Car05g02772 336 ProSitePatterns Cyclins signature. 104 135 IPR006671 -
Car05g02772 336 PIRSF Cyclin_A_B_D_E 1 335 IPR039361 -
Car05g02772 336 SMART cyclin_7 206 294 IPR013763 -
Car05g02772 336 SMART cyclin_7 109 193 IPR013763 -
Car05g02772 336 Pfam Cyclin, C-terminal domain 202 324 IPR004367 -
Car05g02772 336 Pfam Cyclin, N-terminal domain 71 199 IPR006671 -
Car05g02772 336 PANTHER CYCLINS 67 334 IPR039361 -
Car05g02772 336 SUPERFAMILY Cyclin-like 202 327 IPR036915 -
Car05g02772 336 SMART Cyclin_C_2 202 325 IPR004367 -
Car05g02772 336 MobiDBLite consensus disorder prediction 7 22 - -
Car05g02772 336 Gene3D - 71 321 - -
Car05g02772 336 PANTHER CYCLIN-A3-1-RELATED 67 334 - -
Car05g02772 336 Gene3D - 87 200 - -
Car05g02772 336 MobiDBLite consensus disorder prediction 1 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02772 Car-Chr5 72842830 72845429 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02772 6 334 Core Cell Cycle Gene Families AT1G47230 52.436 1.16e-124 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02772 K06627 - gmx:100776007 434.876