Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02767 ATGGCAAACCGTGATCAACCGGTCAACGGAAAAAAGTCAAAGCTTCACCTTCAAGACAATGGTAACCTTGTTTTAAGAGATGCTGATGAATCTCATGTTTGGTCTACAAACACTTTCTCACTTTCCACTGTTCATCTCATTCTTTTAAACACTGGTAACCTCGTTTTATACAATGTTGGTGTTATTTTGTGGCAAAGTTTTGATTTTCCAACTGATACACTTTTACCACAACAAATTTTCAACAGACATTCAAAACTAGTTTGTTCAAGAAGTGAGACAAACAAGTCTTCTGGTTTTTACACATTGTATTTCGACAACGACAACATTCTTCGTCTTCTTTACAATGGTCCCGAAGTTTCAAGCATTTATTGGCCAGATCCTTGGCTAACTGATTGGGATTCTAAAAGAGCTGGTTACAATAACAGCCGAGTTGCGGTTTTGAACACTCTTGGTAACTTTAGTTCATCAGATGATTTCAATTTCATGACATCTGATTATGGAACTTTACTTATGCAGAGAAGATTGAAACTTGACCATGATGGTAACATTCGTGCTTACAGTCGAAGACAAAGAGAAGAAAAATGGTATGTTTCGTGGCAAGCGAAATCGAGACCATGTAGAATTCATGGCGTTTGTGGTCCAAATAGTTTGTGTTCTTATTATAGTAATGGTGTGAAATGTTCTTGTCTTCCTGGTTACAAAATGAAGAATGATGGTGATTGGTCTTATGGGTGTGAACCAAAATTCTCACTTTCTTGCAATAAAACTCAGTCAAGGTTTTTAGTTATAACCAATGTTGAGTTATTTGGTTATGATTATGGGATCATGACAAATTACACACTTGAACAGTGCAAAGAGTTGTGTTTGCAATTATGCAATTGCAAAGGAATTCAATATACTTATGTCATTGCTGGCTCTGGTATACCTGGTACTTATACATGTTACCCGAAATTGCAGTTGCGAAACGCATATCGAATACCGTATTTTAATGCTGATTTGTACTTGAAATTGCCAGAAAATAGTTCATACAATTACAAGGAATCAATGGATGATAAGTACAAACTTGCTTGTTCTGTGAATCCTAAAACAGTAACACTTGAAACAGCACACAATGAAGTTCATGAAGGCAGGTATATTAAGTTTTTGCTATGGTTTGTAGGAGGAATGGGAGGACTTGAAATCTTATGCATATTTATGATGTGGTTTTTCTTAGTAAGAAGAAAAGGGCAACAACATTCTAGAGGAGACACAAGAGTCTATAACATGATTGGTTTTAGAAAATTCAGTTATTCCGAAATAAAAAGAGTAACTAAAAATTTCAGTGAAGAGATTGGAAAAGGTGCAGGAGGGATAGTATACAAAGGTGTGTTATTGGATCAAAGAGTTGtagcagtgaagagactcaaagaagctaatcaaggtgaagaagagtttcaagctgaagttagtagcattggaaggtttaaccacatgaatttgattgagttatggggttattgtgtagatggaaaacacagaatcttggtttatgagtttatggaaaatggttctttggcagaacatataaagtctagaaatttggattggacaaaaagatttgacatagcattaggaacagcaaaaggtttgtgttatattcatgaagaatgtttggagtggattttgcattgtgatgtgaagccacaaaatatacttttggattctaattatcaaccaaaggtgtcagattttggattgtcgaaattaagaaacagaggtgatagtaaattttctagtttttcgaaaatacgaggtacaagaggttacatggcacctgagtgggttttgaatcattcaataacatctaaagttgatgtttttagctatggaattgttgtgttggaaatgataactgggaagagTGCAGCAAAGGATGTTGTTGATATGGGTAATGATGGAGAAGAGAAGGTTGGTTTGGTTGGGTGGTTGAGAGACAAAAGAAATGGAAGAGTTTCATGGGTTGGTGAAATTTTGGAGGATATGGTTGAAGGAGATTATGATGAAAGGAAAATTGAAGGTTTGGTCAATGTGGCTTTACAATGTGTAGAGGAAGAGAAGGATAAGAGACCTACTATGAGTCAAGTTGTAGAGATGCTTCAGAAATTATGCTGTGAAAATCATAATCAGTGA 2169 0.2752 MANRDQPVNGKKSKLHLQDNGNLVLRDADESHVWSTNTFSLSTVHLILLNTGNLVLYNVGVILWQSFDFPTDTLLPQQIFNRHSKLVCSRSETNKSSGFYTLYFDNDNILRLLYNGPEVSSIYWPDPWLTDWDSKRAGYNNSRVAVLNTLGNFSSSDDFNFMTSDYGTLLMQRRLKLDHDGNIRAYSRRQREEKWYVSWQAKSRPCRIHGVCGPNSLCSYYSNGVKCSCLPGYKMKNDGDWSYGCEPKFSLSCNKTQSRFLVITNVELFGYDYGIMTNYTLEQCKELCLQLCNCKGIQYTYVIAGSGIPGTYTCYPKLQLRNAYRIPYFNADLYLKLPENSSYNYKESMDDKYKLACSVNPKTVTLETAHNEVHEGRYIKFLLWFVGGMGGLEILCIFMMWFFLVRRKGQQHSRGDTRVYNMIGFRKFSYSEIKRVTKNFSEEIGKGAGGIVYKGVLLDQRVVAVKRLKEANQGEEEFQAEVSSIGRFNHMNLIELWGYCVDGKHRILVYEFMENGSLAEHIKSRNLDWTKRFDIALGTAKGLCYIHEECLEWILHCDVKPQNILLDSNYQPKVSDFGLSKLRNRGDSKFSSFSKIRGTRGYMAPEWVLNHSITSKVDVFSYGIVVLEMITGKSAAKDVVDMGNDGEEKVGLVGWLRDKRNGRVSWVGEILEDMVEGDYDERKIEGLVNVALQCVEEEKDKRPTMSQVVEMLQKLCCENHNQ 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02767 722 PIRSF SRK 1 722 IPR024171 GO:0004674
Car05g02767 722 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 1 714 - -
Car05g02767 722 SUPERFAMILY Protein kinase-like (PK-like) 418 712 IPR011009 -
Car05g02767 722 Gene3D Transferase(Phosphotransferase) domain 1 513 722 - -
Car05g02767 722 ProSiteProfiles Bulb-type lectin domain profile. 1 69 IPR001480 -
Car05g02767 722 ProSiteProfiles Protein kinase domain profile. 438 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g02767 722 Pfam PAN-like domain 253 301 IPR003609 -
Car05g02767 722 ProSitePatterns Serine/Threonine protein kinases active-site signature. 554 566 IPR008271 GO:0004672|GO:0006468
Car05g02767 722 ProSitePatterns Protein kinases ATP-binding region signature. 444 466 IPR017441 GO:0005524
Car05g02767 722 Gene3D - 1 113 IPR036426 -
Car05g02767 722 CDD PAN_AP_plant 249 338 - -
Car05g02767 722 SMART serkin_6 438 712 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g02767 722 SMART ntp_6 255 337 IPR003609 -
Car05g02767 722 Pfam D-mannose binding lectin 2 84 IPR001480 -
Car05g02767 722 Pfam Protein kinase domain 441 710 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g02767 722 Pfam S-locus glycoprotein domain 161 236 IPR000858 GO:0048544
Car05g02767 722 Gene3D Phosphorylase Kinase; domain 1 405 512 - -
Car05g02767 722 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 1 714 - -
Car05g02767 722 ProSiteProfiles PAN/Apple domain profile. 253 338 IPR003609 -
Car05g02767 722 SUPERFAMILY alpha-D-mannose-specific plant lectins 1 125 IPR036426 -
Car05g02767 722 CDD STKc_IRAK 444 715 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02767 Car-Chr5 72778173 72781192 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02767 368 718 Receptor kinase-like Gene Family AT5G45780 36.264 3.53e-67 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Car05g02767 Pkinase 3.4e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02767 - - gmx:100792388 1038.87