Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02763 ATGGATACTCTTTATTGCTCAGAACAACACTGTGAGGAGGAACAACAATATGAACTACAAGATTACTATTACTGTAACAACACCACCACAATTACAAACTTCAACAACATTCCTTCTTCGTTTTTACAAAAAGACATGTCTTGGAACAATGAAGAGCTGAAATCACTTTTAGCAAAACAGCAAGAAAACTCTATATGCATCTTTCTGGAAACAAACTCGGTTTTGGAAAGTGATCGAAGAGAATCGATTGAATGGATGATGAAAGTGAAAGTTTATTACTCTTTTTCTGCTCTAACAGCTGTTCTTGCTGTTAACTACCTTGATAGGTTTCTGTTCAGTTTTCGTTTTCAGAATGAGAAGCCATGGATGACTCACCTTGCTGCTGTTGCATCTCTTTCACTTGCTGCTAAAATGGAAGAGACCCAAGTTCCTCTTTTACTAGATCTTCAAGTGGAAGATAGTAGATTTTTGTTTGAAGCAAAAACGATTCAGAaaatggagattttggtgctttcaacacttggatggaaaatgaatccagcaactcctctttcgtttatTGACTTTATCATAAGAAGACTTGGATTGAAAGATCGTCTTTGTTGGGAGTTTCTTAAGAGGTGTGAAAGTGTTCTTCTATCTATCATTAGATCAGATTTCAGGTTTTTGAGTTATCTACCTTCTGTATTAGCAACAGCAATAATGATACACGTTTTCAACAGTGTGGAGCCTAATTTAGGAGATGAATACCAAATCCAACTTCTTGGTATTCTTGGAATTAACAAAGAGAAGGTGGATGAATGTGGGAAGCTAATGTTGAAAATGTGGACAGGATATGAGGAGGGGAAGCAATGCAAGAAACGCAAGTTTGTGTCAATTCCAAGTAGTCCAAATGGTGTAATGGATGTGTCATTTAGCAGTGATAATTGGAATGATTCATGGACAATAGCAGCAGCAACAACAGCTAATTCAGTTTCATCTTCACCTGAGCCTTTGTCTAAGAAGATCAGGACTCAAGATCAGCTTCTAATAAACTCTTCTACCAATTCTGATTTTCTCACCATTCCTCATTAG 1074 0.3454 MDTLYCSEQHCEEEQQYELQDYYYCNNTTTITNFNNIPSSFLQKDMSWNNEELKSLLAKQQENSICIFLETNSVLESDRRESIEWMMKVKVYYSFSALTAVLAVNYLDRFLFSFRFQNEKPWMTHLAAVASLSLAAKMEETQVPLLLDLQVEDSRFLFEAKTIQKMEILVLSTLGWKMNPATPLSFIDFIIRRLGLKDRLCWEFLKRCESVLLSIIRSDFRFLSYLPSVLATAIMIHVFNSVEPNLGDEYQIQLLGILGINKEKVDECGKLMLKMWTGYEEGKQCKKRKFVSIPSSPNGVMDVSFSSDNWNDSWTIAAATTANSVSSSPEPLSKKIRTQDQLLINSSTNSDFLTIPH 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02763 357 SMART Cyclin_C_2 181 309 IPR004367 -
Car05g02763 357 PANTHER CYCLINS 29 337 IPR039361 -
Car05g02763 357 Pfam Cyclin, C-terminal domain 182 307 IPR004367 -
Car05g02763 357 SMART cyclin_7 84 172 IPR013763 -
Car05g02763 357 SUPERFAMILY Cyclin-like 163 297 IPR036915 -
Car05g02763 357 Gene3D - 70 179 - -
Car05g02763 357 CDD CYCLIN 79 171 IPR013763 -
Car05g02763 357 Gene3D - 180 269 - -
Car05g02763 357 PANTHER CYCLIN D3.1 PROTEIN 29 337 - -
Car05g02763 357 SUPERFAMILY Cyclin-like 49 179 IPR036915 -
Car05g02763 357 ProSitePatterns Cyclins signature. 79 110 IPR006671 -
Car05g02763 357 Pfam Cyclin, N-terminal domain 59 179 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02763 Car-Chr5 72724747 72726832 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02763 1 354 Core Cell Cycle Gene Families AT5G67260 45.404 1.23e-90 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02763 K14505 - aprc:113874132 409.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02763 05 72724747 72726832 Car07g01415 07 13323964 13326128 ECH
Car05g02763 05 72724747 72726832 Car04g01473 04 14957723 14960638 ECH
Car05g02763 05 72724747 72726832 Car05g02763 05 72724747 72726832 ECH