Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02761 ATGTCATTTCTCATCCTAACACTGCTACTTCTCTCAAACACATTTTCCTGCAACTCCTCCAAACTCAAAACCCCACCCTCACCTCTCTCAGATCCTACAGCATTACTAGCATTCAAATCCAAAGCAGACTTAAACAACCATCTCAACTTCACCACCAAAACCCCTTTCTGCAACTGGCAAGGTGTTCAATGCAACAACCAATCCAAAGTACTTCGTCTCGTTCTCCGAAGCATAGATCTCGGCGGCGTTTTCGCTTCTCACACATTATCCCGTCTCGACCAACTCCGTGTCCTCAGTTTACAGAACAACTCCCTCACCGGAACCATACCTAACCTCTCCGGCCTCGTCAATCTTAAAACTCTCTTCCTTGATAACAACCACTTCACCGGTTCTCTACCACTTTCTATTTTCTCTCTTCACAGACTTCGAACCTTGGATTTCTCTCATAACAATCTCTCTGGAACTATTCCTATAGCTTTCACCAAGCTTGATCGTCTTTACTATCTCCGTTTAAGCTTCAACGCTTTCACCGGAGCTATTCCTCCTTTTAATCAGTCTTCTCTCAAAACTTTTGATGTTTCCGGTAACAATCTCTCCGGCGCGGTTCCGTTAACCTCCACTCTGTCTCGTTTTCAGCCTTCTTCATTCGCCTCAAACCCTAATCTCTGCGGCGAAATCGTTCGGATAGAATGTCGTCCTACAGCGCCGTTTTTCGCACCGAGTTCACCGCCAACGGTTGGACTCGGACAGAGCGCGCAGGTTCATGGATTAATCCGGCAGCCGTACGAGAAGAAACGCGATCGAAAGGCGGTGATTATCGGATTCTCTACCGGAATTTTTTTCCTGATCGGTTCGCTGGTTTGCTTCGCGGCGGTGATTAAGAAACAGAGAAAGAAAAAAGGAAAAGGTTCGTCTGGTTCAAGTGTGATGGCTTCGGATGCAGCGGCGACGGCGGAGGCTGCGGTTGTGATGCAAATGGAACAAGAGAGGGAATTAGAAGAAAAGGTGAAGAGAGCGCAAGTTGCAAAAAGTGGGAGTTTAATATTCTGTGCGGGTGAGTCGCAGGTGTATACGCTGGACCAGTTGATGAAAGGATCTGCGGAGCTTTTAGGAAGAGGGTGTTTGGGAACAACTTATAAAGCGGTGCTTGATAACCGTTTGATTGTAACAGTGAAGCGTCTTGATTGTGGGAAAATGGGTGGGCACGTGACAAAGGAAGTGTTTGAGCGTCACATGGAATCAGTAGGTGGTCTTCGTCATCCTAATTTGGTTCCTCTTAGGGCTTTTTTTCAGGCGAATCAAGAGAGACTCATTATCTATGACTATCAGCCCAATGGAAGTCTCTTATCTCTTGTACACGGTTCCAGATCAAGCAGGGCAAGGCCATTGCACTGGACATCATGCTTAAAAATAGCAGAGGACGTAGCACAAGGGCTTTCTTACATCCACCAGGCATGGAGACTGGTCCATGGCAATCTCAAGTCCTCCAATGTTCTCCTAGGACCCGATTTTGAGGCATGCATCACAGACTACTGCCTGTCTTTGTTGAGCAATGTATCTACCTTCGACGAGGTTGGTGATTCTGCACCCTACAGAGCTCCAGAGACTCGCAATCCAAATCACCAGCCAACCCCAAAATCCGACGTTTATGCTTATGGTATTTTGTTGCTAGAGCTTCTGACTGGGAAATATGCTTCTGAGCTCCCATTCATGGTTCCTGGTGATATGTCAAGATGGGTGAGATCCATCAGGGATGACAATGGAAGCGAAGACAACAGAATGGATATGCTTCTTCAAGTGGCTACAACTTGTAGCTTGATTTCTCCAGAGCAGAGACCCACAATGTGGCAGGTCTTGAAGATGTTACAGGAAATCAAAGAGATTGTACTATTGGAGGATAGTGAATTGGATCTACGCAGTAGTAATGTCGTGTCTTAA 1938 0.4644 MSFLILTLLLLSNTFSCNSSKLKTPPSPLSDPTALLAFKSKADLNNHLNFTTKTPFCNWQGVQCNNQSKVLRLVLRSIDLGGVFASHTLSRLDQLRVLSLQNNSLTGTIPNLSGLVNLKTLFLDNNHFTGSLPLSIFSLHRLRTLDFSHNNLSGTIPIAFTKLDRLYYLRLSFNAFTGAIPPFNQSSLKTFDVSGNNLSGAVPLTSTLSRFQPSSFASNPNLCGEIVRIECRPTAPFFAPSSPPTVGLGQSAQVHGLIRQPYEKKRDRKAVIIGFSTGIFFLIGSLVCFAAVIKKQRKKKGKGSSGSSVMASDAAATAEAAVVMQMEQERELEEKVKRAQVAKSGSLIFCAGESQVYTLDQLMKGSAELLGRGCLGTTYKAVLDNRLIVTVKRLDCGKMGGHVTKEVFERHMESVGGLRHPNLVPLRAFFQANQERLIIYDYQPNGSLLSLVHGSRSSRARPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSSNVLLGPDFEACITDYCLSLLSNVSTFDEVGDSAPYRAPETRNPNHQPTPKSDVYAYGILLLELLTGKYASELPFMVPGDMSRWVRSIRDDNGSEDNRMDMLLQVATTCSLISPEQRPTMWQVLKMLQEIKEIVLLEDSELDLRSSNVVS 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02761 645 Pfam Protein tyrosine and serine/threonine kinase 368 622 IPR001245 GO:0004672|GO:0006468
Car05g02761 645 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 6 634 - -
Car05g02761 645 Pfam Leucine rich repeat 117 175 IPR001611 GO:0005515
Car05g02761 645 Gene3D Ribonuclease Inhibitor 185 229 IPR032675 -
Car05g02761 645 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 6 634 - -
Car05g02761 645 SUPERFAMILY L domain-like 29 224 - -
Car05g02761 645 Gene3D Transferase(Phosphotransferase) domain 1 444 635 - -
Car05g02761 645 ProSiteProfiles Protein kinase domain profile. 364 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g02761 645 ProSiteProfiles Leucine-rich repeat profile. 94 116 IPR001611 GO:0005515
Car05g02761 645 SUPERFAMILY Protein kinase-like (PK-like) 368 627 IPR011009 -
Car05g02761 645 Gene3D Ribonuclease Inhibitor 29 184 IPR032675 -
Car05g02761 645 Gene3D Phosphorylase Kinase; domain 1 330 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02761 Car-Chr5 72702711 72706616 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02761 31 642 Receptor kinase-like Gene Family AT5G43020 59.019 0.0 695
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Car05g02761 PK_Tyr_Ser-Thr 3.4e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02761 - - cam:101511242 1209.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02761 05 72702711 72706616 Car05g02761 05 72702711 72706616 ECH