Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02758 ATGGAACAAGAAAGAGATTGTTGTTCAACAATCATACGAAACAGAACCAACAACAACAACGCCCaagaaaaacacaaacaacaagagaaaccatacagaggaataagaaaaagaaaGTGGGGTAAGTGGGTAGCAGAAATAAGAGAACCAAACAAAAGATCAAGAATTTGGTTGGGTTCTTACATAACCCCCGTAGCCGCCGCACGTGCCTACGACACCGCTGTATTTTATCTAAGAGGTCCTTCGGCTCGTCTTAATTTCCCAGAACTGCTGTTTCAAGACGACGAAGAAAACAACGGCGACGACGGTTCTGTTCAACAAGGTGATATGTCTGCTGATTTAATACGGAAAAAAGCCACTCGAGTCGGTGCTAGAGTTGATGCTCTCCAAACAGCTCTTCAGGATTCAACACGCTCCACTTCTACTCAATTTATGTCTCATGTTAAACCAGATTTGAATGAGTATCCAAAACCTGAAGATTAA 483 0.3872 MEQERDCCSTIIRNRTNNNNAQEKHKQQEKPYRGIRKRKWGKWVAEIREPNKRSRIWLGSYITPVAAARAYDTAVFYLRGPSARLNFPELLFQDDEENNGDDGSVQQGDMSADLIRKKATRVGARVDALQTALQDSTRSTSTQFMSHVKPDLNEYPKPED 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02758 160 ProSiteProfiles AP2/ERF domain profile. 31 88 IPR001471 GO:0003700|GO:0006355
Car05g02758 160 SMART rav1_2 31 94 IPR001471 GO:0003700|GO:0006355
Car05g02758 160 CDD AP2 32 90 IPR001471 GO:0003700|GO:0006355
Car05g02758 160 Pfam AP2 domain 32 80 IPR001471 GO:0003700|GO:0006355
Car05g02758 160 PRINTS Ethylene responsive element binding protein signature 32 43 IPR001471 GO:0003700|GO:0006355
Car05g02758 160 PRINTS Ethylene responsive element binding protein signature 70 90 IPR001471 GO:0003700|GO:0006355
Car05g02758 160 MobiDBLite consensus disorder prediction 133 160 - -
Car05g02758 160 Gene3D AP2/ERF domain 31 89 IPR036955 GO:0003700|GO:0006355
Car05g02758 160 SUPERFAMILY DNA-binding domain 31 89 IPR016177 GO:0003677
Car05g02758 160 MobiDBLite consensus disorder prediction 133 148 - -
Car05g02758 160 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 15 160 - -
Car05g02758 160 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 15 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02758 Car-Chr5 72665482 72666549 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02758 1 150 AP2-EREBP Transcription Factor Family AT1G46768 55.333 4.72e-50 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Car05g02758 AP2 3e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02758 K09286 - gmx:732579 223.016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02758 05 72665482 72666549 Car05g02758 05 72665482 72666549 ECH