Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02754 ATGACTTCCCCTACCACTAAACGAGTTTCAGAATGTTTTATCAAGCCAATTCATCCTATCAAAGAATCAAATCAAATATGTTATTTAACAGGTTGGGATATTGCTATGTCATCTATGCACTACATCCAAAAAGGATTATTATTTACAAAACCAACACCACAAAAATTCATTGAGAAACTCAAACACTCTCTCTCTATTGCACTTTTCCATTTCTACCCTCTTTCTGGTCGCCTTGTCACCCACAAAAGTCAACACCCTCATTCTTATACAATTTTCATTGATTGTAGTAATAATAATCCTGGAGCTAGATTCATCTACGCAACTTTGGATGTGTCCATTTCCCATATCCTCTCACCAGTTGATGTTCCTCCTTTTGTTGACTCATTTTTTGATCTCAACAAAGCAACCAACCACGATGGTCACACCCTTCCACTTTTATCAATTCAAGTCACTGAGTTAATAGATGGTGTTTTCATAGGTTGTTCCATGAATCATTGTATTGGTGATGGAACTTCTTTCTGGAATTTTTTTAATGTATGGTCTGAGATATTTCAACATGAAAACGATGTTCATGTTCATGTTTCTCACAATCGTTGGTTTCCAAATGGTTATGGTCCACCAACCAATCTTCCCTTCAAACATCACGAGGAGTTTATCAACAAATATGAATCACCTAATTTTAGAGATAGATTCTTCCATTTTACGAAAGANNNNNNNNNNNNNNNNNNNNNNNNNGAGTGTATTGCAAAGTTGAAACAAAAGGCAAATAAGGAATACAAGACAACAAAAATATCTTCGTTCCAAGCCTTATCAGCACATGTTTGGAGATGTGTGACACGCGCGCGAGGACTAAGAGATGATCAAAAAACCAGTTGTAAGTTAGCCATAAACAATAGATTGAGAATGGAACCGCCTCTTCCAAAAGAATACTTTGGAAACTCGGTTGATGTGGTTAGTACAGAAACGAGTGTGAAGGAATTGGTTGAGAATGATTTGGGATGGGCAGCATGGAAAGTGCATATGAGTGTTGTGAATCATGATGACAGAGAAGTGAGAGAGATGATTCAAAAGTGGTTAGAGGATCCTGTTGTTTACCAACTTGGTCGACACTTTGATCCTTATAGTATTACAGTGTCAAGTTCACCGAGGTTTAATATGTATGGGAATGAATTTGGAATGGGGAAAGCTGTGGCGGTTTTGAGTGGATATGCAAATAAATTTGATGGGAATGTGTCATCATATGAGGGGTATGAACCTGGAACTATAGATTTGGCGCTAACTCTTACACCTCATGCAATGATGGCGTTGGAATCGGACCCTCACTTCCTCAATCCACTTTAA 1341 0.3721 MTSPTTKRVSECFIKPIHPIKESNQICYLTGWDIAMSSMHYIQKGLLFTKPTPQKFIEKLKHSLSIALFHFYPLSGRLVTHKSQHPHSYTIFIDCSNNNPGARFIYATLDVSISHILSPVDVPPFVDSFFDLNKATNHDGHTLPLLSIQVTELIDGVFIGCSMNHCIGDGTSFWNFFNVWSEIFQHENDVHVHVSHNRWFPNGYGPPTNLPFKHHEEFINKYESPNFRDRFFHFTKXXXXXXXXXECIAKLKQKANKEYKTTKISSFQALSAHVWRCVTRARGLRDDQKTSCKLAINNRLRMEPPLPKEYFGNSVDVVSTETSVKELVENDLGWAAWKVHMSVVNHDDREVREMIQKWLEDPVVYQLGRHFDPYSITVSSSPRFNMYGNEFGMGKAVAVLSGYANKFDGNVSSYEGYEPGTIDLALTLTPHAMMALESDPHFLNPL 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02754 446 Gene3D - 214 438 IPR023213 -
Car05g02754 446 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 444 - -
Car05g02754 446 Pfam Transferase family 13 442 - -
Car05g02754 446 Gene3D - 2 205 IPR023213 -
Car05g02754 446 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 1 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02754 Car-Chr5 72640485 72642180 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02754 58 402 Monolignol Biosynthesis Gene Families AT5G48930 28.032 2.87e-32 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02754 - - lja:Lj1g3v1664450.1 625.55