Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02750 ATGAATTTCAAGGGATTTGGAAATGATCCTGGAGCCTCTGCCGGCGGCGGAGGGAGGACGACGACGGGGAATTTTTCCCTGGCGCGTCAAACGTCGGTATATTCTCTGACGGTTGACGAATTCATGAACAGTATGGGAGGTTCTGGGAAGGATTTTGGGTCAATGAACATGGATGAATTGTTGAAGAATATTTGGAGTGCTGAAGAGGTTCAAACAATGGGTGGTGAAGAAGGTATTAGTCATTTACAAAGACAAGGTTCTTTAACACTACCTCGTACACTTAGTCAGAAAACAGTTGATGAGGTTTGGAAGGATATTTCAAAGGATTATGGTCCTAGTTTAGCTGCTCCACAAGCTCAGAGACAACCAACTTTGGGAGAGATGACTTTGGAAGAGTTTTTGGTTAGAGCTGGTGTTGTTAGAGAAGATGCAAAACCAAATGATGGTGTTTTTCTTGATATGGCTCGTCTTGGGAATAATAATAGTAACTTGGGTTTGGCTTTTCAGGCTCAACAGTTGAATAAGGTTTCTGATTTTATGGGTAATAATAGGATTTCTGTTAATGATAATCATTCACTTGTGGGTCTTCAATCTCCTACTACTAATTTGCCCTTGAATGTTAATGGGATTAGaacatcaaatcagcaacagatgcagaattcacagactcagcaacagcaccagaatcaacaacttcagcaacatcaacatcaaaatcagcatcagcaGATATTTCCGAAGCAGCCGGGTTTGAACTATGCAACTCAGATGCCTTTGTCTAGCAATCAAGGGATGAGAGGTGGAATTGTGGGGCTTTCTCCTGATCAAGGAATGAATGGTAATCTTGTGCAAAGTGGAGGGATCGGCATGGTTGGTTTGGCGCCCGGGGCTGTTCAGATTGGTACTGGATCGCCGGCGAACCAGATATCTGGTGATAAAATTGGAAAGACTAATGGTGGTGATACTTCTTCTGTGTCACCGGTTCCTTATGTCTTTAATGGAGGTATGCGAGGTAGGAAGACTAATGGAGCTGTTGAGAAGGTAATTGAGAGGAGGCAGAGAAGAATGATAAAGAATAGGGAGTCAGCTGCTAGATCCCGCGCTCGCAAGCAGGCTTATACCATGGAATTGGAAGCAGAAGTTGCAAAGTTAAAAGAAGAGAATGAAGAACTTCAGAAAAAGCAGGCAGAAATCATGGAAATTCAGAAAAATCAAGTTAAGGAAATGATGAATCTGCAGCGAGAAGTCAAGAGAAAATGCTTAAGACGAACACAAACTGGTCCGTGGTAG 1290 0.3961 MNFKGFGNDPGASAGGGGRTTTGNFSLARQTSVYSLTVDEFMNSMGGSGKDFGSMNMDELLKNIWSAEEVQTMGGEEGISHLQRQGSLTLPRTLSQKTVDEVWKDISKDYGPSLAAPQAQRQPTLGEMTLEEFLVRAGVVREDAKPNDGVFLDMARLGNNNSNLGLAFQAQQLNKVSDFMGNNRISVNDNHSLVGLQSPTTNLPLNVNGIRTSNQQQMQNSQTQQQHQNQQLQQHQHQNQHQQIFPKQPGLNYATQMPLSSNQGMRGGIVGLSPDQGMNGNLVQSGGIGMVGLAPGAVQIGTGSPANQISGDKIGKTNGGDTSSVSPVPYVFNGGMRGRKTNGAVEKVIERRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKEENEELQKKQAEIMEIQKNQVKEMMNLQREVKRKCLRRTQTGPW 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02750 429 Coils Coil 218 238 - -
Car05g02750 429 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 349 400 IPR004827 GO:0003700|GO:0006355
Car05g02750 429 Coils Coil 367 419 - -
Car05g02750 429 Gene3D - 349 407 - -
Car05g02750 429 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 6 429 - -
Car05g02750 429 Pfam bZIP transcription factor 351 401 IPR004827 GO:0003700|GO:0006355
Car05g02750 429 SMART brlzneu 347 412 IPR004827 GO:0003700|GO:0006355
Car05g02750 429 MobiDBLite consensus disorder prediction 1 24 - -
Car05g02750 429 MobiDBLite consensus disorder prediction 214 244 - -
Car05g02750 429 CDD bZIP_plant_BZIP46 351 405 - -
Car05g02750 429 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 354 369 IPR004827 GO:0003700|GO:0006355
Car05g02750 429 SUPERFAMILY Leucine zipper domain 351 400 IPR046347 GO:0003700|GO:0006355
Car05g02750 429 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 6 429 IPR043452 GO:0003700|GO:0045893
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02750 Car-Chr5 72561505 72566166 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02750 27 429 bZIP Transcription Factor Family AT3G19290 46.744 2.89e-92 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Car05g02750 bZIP_1 9.3e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02750 K14432 - gmx:100101876 511.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02750 05 72561505 72566166 Car05g02750 05 72561505 72566166 ECH