Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02738 atggtgtcatcatcatatgaagatagtcgtcgcaaaagaatggaagaaaatcgaaagagaatggaagctcttaatcttcctcagctctcccaatcccttcacaaatcatcttctcccattaaaaaaccctcaccgTCGAAACCTCGCATCATCCAGAAAGAGCTTGTTGTTGTCAGAAGATCCGGCCGTGTCGCCAACTTGCCCGCTCCCATTTACAAAGAAGTTCTTATTGATCGCGTTATAATACCTAGAAATAGAACTTCAAGAGGAGGTTATAATATGTATAGGGATTATTCAAAGAGGGTATATGCCTCAGATGAAGCTAGAGAGGAGGCATTGCAGAAAGCAGATAAGTTGCAGTCAGATTTGAATTCTAAACATCCAATTTTTATTAAATCAATGCTCCAATCTCACGTCACTGGTGGATTCTGGCTGGGCCTTCCAAATCATTTCTGCAAGAAAAACCTTCCACTACGGGATGCAATGATGACCTTGATTGATGAGGATGGGGATGAGTATCCAACAACATATTTGGCTCAAAAAACTGGACTTAGCGCTGGATGGAGAGGTTTTGCTATTGCTCATAAGCTTGCTGATGGCGACGCTTTAATTTTTGAATTAGTTAAACGCACTGTATTCAAGGTGTACATTATTAGATTGGAGATTGGAGGCAGTAAAGTTAATCTAGGTTCTAATATGCTCATCCTGGATTCAGTTTTTGGTGTTGTAGTATTGTTGACAACCTCTTTCTCTTTCTCTCTCTCCCAACGATGCAAGTTTTGCAGAACCGATCAACGTTTTTCAACCACGGCATTTCAACGCATCTCAATACTTTTGCGCCTGATCGCTACTCTTAACCTCTTTTTGTTCCATTTTCAAGATTTTGTTGTAACCGAAGAAACGATTTCGGGAAGAATTAAATTGAAGCAAAACGTGTTGTTGAGGAATCTGGTTTTGTCTTAA 963 0.3437 MVSSSYEDSRRKRMEENRKRMEALNLPQLSQSLHKSSSPIKKPSPSKPRIIQKELVVVRRSGRVANLPAPIYKEVLIDRVIIPRNRTSRGGYNMYRDYSKRVYASDEAREEALQKADKLQSDLNSKHPIFIKSMLQSHVTGGFWLGLPNHFCKKNLPLRDAMMTLIDEDGDEYPTTYLAQKTGLSAGWRGFAIAHKLADGDALIFELVKRTVFKVYIIRLEIGGSKVNLGSNMLILDSVFGVVVLLTTSFSFSLSQRCKFCRTDQRFSTTAFQRISILLRLIATLNLFLFHFQDFVVTEETISGRIKLKQNVLLRNLVLS 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02738 320 SUPERFAMILY DNA-binding pseudobarrel domain 123 219 IPR015300 -
Car05g02738 320 ProSiteProfiles B3 DNA-binding domain profile. 130 221 IPR003340 GO:0003677
Car05g02738 320 PANTHER B3 DOMAIN-CONTAINING PROTEIN 4 221 - -
Car05g02738 320 MobiDBLite consensus disorder prediction 1 47 - -
Car05g02738 320 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 4 221 IPR044837 -
Car05g02738 320 MobiDBLite consensus disorder prediction 1 22 - -
Car05g02738 320 Gene3D - 104 221 IPR015300 -
Car05g02738 320 Pfam B3 DNA binding domain 130 219 IPR003340 GO:0003677
Car05g02738 320 SMART B3_2 130 221 IPR003340 GO:0003677
Car05g02738 320 MobiDBLite consensus disorder prediction 24 43 - -
Car05g02738 320 CDD B3_DNA 128 219 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02738 Car-Chr5 72462824 72473873 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02738 1 238 B3 DNA Binding Superfamily AT3G19184 51.230 4.48e-67 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Car05g02738 B3 1.7e-14 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02738 - - gmx:100797091 301.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02738 05 72462824 72473873 Car05g02738 05 72462824 72473873 ECH