Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02723 ATGACTCCCGCTACTAACAAACCTTCTTCGAACAAAGCCAAGGGAGAATCGATTCAGCAGCGCAGACTCACCAGACAGAGTAGATTGCGATACCGAATTGAACAAGACGCTGATGCTTTTCATTCAAACGACGCCGTTGTCTCTTCTTTACCGGCTTCTCCTCTTCGCTCTACTTGCGATCGTTGGTCTTCTTCTGCTGTCCCTCAACCGCTTCCACTTCCTGAGTCACCGTTGACTCGACGACCTGATCATCTTCACGCCTTACCGTTTTCCAGAAAGACGTCGGATCATGATGCTGTGAAAACTTCAAGGTCTTCCAGCAATTTGGGTAGACCCTCTTTTGACACAGTGATCGGAAATGCAAACTGTGATTTGAGAGTGAATATTCCTCCTGCCAGAGGCTTGGTGGCAAGCAATAGTTCTTGTAAAGATCATAGAAAACATTCTCATGATAATGACTCTGAAGGTATTTCCAACTTGAAATCGCAATTTGCTGCCAAGAGTGCCCCAACAAGCATATTCTCCAGTCCTGTTACTAGTCCACGCAGATTAAGCAATGTAGATTTGTTTGATCCTTTCACCAATTTTCCTCAAGATTTTAATGACATTTTGAGAGTTTTGCCTACTAAAACTGCTCATAGTCCAGACCTGTCTCCTCGTCGTAGCCTTGGGAACCATGGTCCTAACCTCAACCACACTATTCATGGGGGTTTTCAGCACTCTAAATTTTTCTCCAGAGTGTGGCCTGAAAATAACCATGTCGATGCACATCCATTGCCCCTTCCGCCGAGGGCTTCACCACCACCACAATCACCTGCACAACATCAATCAAGTGTCGCGACACATCACACAACAGAAAATTTTCATTCAATGAAGGGTCAATGGCTCAAAGGAAAACTTATTGGGCGAGGATCGTTTGGAAGTGTTTACCATGCCACAAACCTGGAGACCGGAGCTTCATGTGCAATGAAAGAGGTGGATCTTTTTCTTGATGATCCTAAATCTGCTGACTGCATAAAGCAGCTAGACCAGGAAATCAGAATTCTTGGTCAACTACACCACCCCAACATTGTGAAATATTATGGCAGTGAAGTAGTTGGTGATCAATTGTGCATATATATGGAATATGTCCATCCTGGATCGCTTCATAAGTTTATGCATGAACATTGTGGGGCTATGACTGAATCTGTTGTTCGCAATTTTACATGGCATATTCTCTCTGGGTTGGCGTACTTACATAGTACCAAGACCATCCACAGGGACATTAAAGGTGCAAACTTGCTGGTTGATGCATCAGGCACTGTCAAGCTTGCAGATTTTGGGGTGTCGAAAATTCTGACAGAGAAGTCATATGAAGTTTCGCTGAAAGGAAGTCCCTACTGGATGGCTCCAGAGCTCATGATGGCTGCCATGAAGAAAGAATCCAATCCTGAAGTCGCAATGGCTGTTGATATCTGGAGCTTAGGATGCACCATCATTGAAATGCTGACAACAAAACCTCCTTGGAGCGAGTTAACAGGGTATCAAGCCATGTTCAAAATACTGCACAGATCCCCGGACATACCCAAAACTTTATCTCCAGAAGGACAGGATTTCCTTCAGCAGTGTTTCCGAAGGAATCCTGCAGATCGACCATCCGCAGCTGTGCTTCTAACACATGCTTTTGTAAAAAAATTGCATGATCAAGATGTAATAGTTCATTCACAAGGCTATCCTAAAGAAGACACTGGACCAAGAGATGATTCACGTAAACATAGTCCAGGACACGGTTCGAAAAATGGCCGTGGTACAGTACCAGCCGCCTTTCGTGCACGATTTTTTTATAAAGTTCAAAGTTTAATCGGTGATACTTCCAAAAAAGTTGATACCGAGGAAACTAATCAAGTTAGATCTTCTCCTGCATCTCCTTGCTCGTTGACAGAAGATAACAGTCCTCAATCTCCCTTTAAGGCTAATACCCGCAATTGCATGACGACTACCAAATCCTCCAACGTACCGTTCGCTGTTATGAGAATCGTGAAGCACCTATGA 2031 0.4412 MTPATNKPSSNKAKGESIQQRRLTRQSRLRYRIEQDADAFHSNDAVVSSLPASPLRSTCDRWSSSAVPQPLPLPESPLTRRPDHLHALPFSRKTSDHDAVKTSRSSSNLGRPSFDTVIGNANCDLRVNIPPARGLVASNSSCKDHRKHSHDNDSEGISNLKSQFAAKSAPTSIFSSPVTSPRRLSNVDLFDPFTNFPQDFNDILRVLPTKTAHSPDLSPRRSLGNHGPNLNHTIHGGFQHSKFFSRVWPENNHVDAHPLPLPPRASPPPQSPAQHQSSVATHHTTENFHSMKGQWLKGKLIGRGSFGSVYHATNLETGASCAMKEVDLFLDDPKSADCIKQLDQEIRILGQLHHPNIVKYYGSEVVGDQLCIYMEYVHPGSLHKFMHEHCGAMTESVVRNFTWHILSGLAYLHSTKTIHRDIKGANLLVDASGTVKLADFGVSKILTEKSYEVSLKGSPYWMAPELMMAAMKKESNPEVAMAVDIWSLGCTIIEMLTTKPPWSELTGYQAMFKILHRSPDIPKTLSPEGQDFLQQCFRRNPADRPSAAVLLTHAFVKKLHDQDVIVHSQGYPKEDTGPRDDSRKHSPGHGSKNGRGTVPAAFRARFFYKVQSLIGDTSKKVDTEETNQVRSSPASPCSLTEDNSPQSPFKANTRNCMTTTKSSNVPFAVMRIVKHL 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02723 676 SMART serkin_6 295 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g02723 676 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 9 670 - -
Car05g02723 676 MobiDBLite consensus disorder prediction 61 113 - -
Car05g02723 676 MobiDBLite consensus disorder prediction 1 27 - -
Car05g02723 676 MobiDBLite consensus disorder prediction 1 17 - -
Car05g02723 676 ProSitePatterns Protein kinases ATP-binding region signature. 301 324 IPR017441 GO:0005524
Car05g02723 676 SUPERFAMILY Protein kinase-like (PK-like) 270 572 IPR011009 -
Car05g02723 676 MobiDBLite consensus disorder prediction 79 100 - -
Car05g02723 676 MobiDBLite consensus disorder prediction 568 588 - -
Car05g02723 676 MobiDBLite consensus disorder prediction 627 651 - -
Car05g02723 676 Pfam Protein kinase domain 297 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g02723 676 MobiDBLite consensus disorder prediction 254 281 - -
Car05g02723 676 Gene3D Transferase(Phosphotransferase) domain 1 294 587 - -
Car05g02723 676 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 9 670 - -
Car05g02723 676 MobiDBLite consensus disorder prediction 568 597 - -
Car05g02723 676 ProSiteProfiles Protein kinase domain profile. 295 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g02723 676 MobiDBLite consensus disorder prediction 211 235 - -
Car05g02723 676 MobiDBLite consensus disorder prediction 619 651 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02723 Car-Chr5 72319641 72325475 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02723 255 557 MAP Kinase Kinase Kinase AT5G66850 66.337 3.55e-141 426
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Car05g02723 Pkinase 1e-65 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02723 05 72319641 72325475 Car05g02723 05 72319641 72325475 ECH