Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02718 ATGCGTGCCTCCGGCTACTTTCTATTTTTCTCATTTTTCCTCTTTTCATCAACATCATTTTTATCCCATGCTCTTTCCAATGAAGAAGTCTCTTTCATTGCACGGCGACAATTATTACACCTTCACGAAAATGAGGATTTGCCCGAAAATTACACAGATAATTATACAACAGATTTAACTTTTCCTCATCCAGGATTAAAACGTGCTTATATTGCACTTCAAGCATGGAAAAAGGCAATGTATTCAGACCCATTAAATTCCACGGCTGATTGGGTGGGCCCTGATGTTTGTTCTTATCATGGAGTTTTTTGTGCACCTTCACTTAATGATTCAAACATTGAAGTTGTGGCTGGGATTGATCTTAATCATGCTGACATTGCGGGTTACATTCCTTCTGAGTTTGGTTTGTTGACCGATCTTGCTCTTTTGCACATTAACTCAAACAGATTTTGTGGTATCATACCAAAAAGTTTCTCTAAGTTGATACTTTTGTATGAACTTGATATTAGTAACAACCGTTTTGTTGGAACATTCCCTACACCCGTTCTTTCAATTCCAGATATCAAATTCATTGATCTTAGGTACAATGATTTTGAAGGAGAGATTCCCTCAGAGCTTTTCAACAAACAATTGGATGCTATATTTTTGAACAACAACAGATTCACATCCACAATTCCTGAAAATTTGGGATCTTCTCCAGCTTCTGTTGTTGTTTTAGCCAATAATCATTTAAGTGGTTGTATTCCTGCAAGCATTGGTGAAATGAAAAACACATTGAATGAGTTTGTTATACTCAACAACAACCTCACTGGTTGTTTACCCTCTGATATTGGAAAGCTTGAAAATGTAACAGTTTTTGATGTGAGTGAAAATGTGTTTGTTGGTGTATTGCCAAGAACATTTAAGGGATTGAAAAATGTTGAAAAGTTGTCAATTGCTCATAACAAGCTCACAGGTTTTGTTCCAAGAAGTGTATGTACGTTGTCTAGTTTGGTGAATTTTACATTCTCTTATAATTATTTTAATGGTGAGGAAGAAGGTTGTGTGCCACCTAGAAAAGATATTTGGTTGAATGATAAGTATAATTGTATACCAGATAGACCTAGACAGAAGGCAACAAATGATTGCAATGTGGTTATAAGTAAACCTGTTGATTGTAGTAAGGCACAATGTGgtggaagtggaagtggaaatggaaatggaaatggaagtggaagtggaagtggaagtggaaCAGGATCAGGATCATCAGGAAGTGGAAGTGGAACTCCATCTCAGTCAAACTCTCCCCCAAGTGATCAAAAGGAAACACCAACACCAAGCACACCTTCTGTTCCAAAGCCAGATCCAAAATCTTCTCCTTCAAATCCTCCAAGTGAAAATCCAACACCTTCAGTGCCAAAGCCACAACCACAACCTACACCATCTCCTTCAAAGCCAGAACCTAAACCTACACCTTCTTCACCTTCCAACCCTTCACCAAATCCAAATCCAACACCAACCCCATCAACACCAAAGCCAAAGCCTACTCCTTCTCCATCAAATCCTCCACCAAGTGAAAAGCCAACACCAACACCACAACCTAAACCAACCCCATCATCACCTTCCAATCCACCATCGAGTGAGAAGTCAGAGCCCGAGCCAGAGCCAAAACCACAACCTAAACCAACCCCATCACCACCTTCCAATCAACCACCAAGTGAGAAGCCACAACCAGAACCCTCACCTCCACCCTCACCCAAAGCAGAACCACCACCTGATGATGATCCTCATCATGAAGCACCAAAAAGAAGAACAAGGTCTCCACCACCTCCTCTCTATTCTCCTCCACCACCCGTTCATTCCCCACCGCCTCCAACTGTCCACTCTCCACCACCACTGGTTCACTCGCCTCCTCCACCAGTTCATTCCCCACCACCACCAGTTAACTCTCCTCCTCCACGAGTCAATTCCCCACCACCACCAGTTAACTCTCCTCCTCCACCGGTTCACTCACCTCCTCCGCCAGTCAATTCTCCACCACCTCCAGTTCACTCACCTCCTCCGCCAGTCAATTCCCCACCACCTCCAGTTCACTCACCTCCTCCACCAGTCAATTCCCCACCACCTCCAGTTCACTCACCTCCTCCACCAGTCCATTCTCCACCACCTCCAGTTCACTCACCTCCACCTCCAGTCCACTCTCCACCACCTCCAGTTCACTCACCTCCACCTCCAGTCCACTCTCCACCGCCACCAGTTTCTTCTCCACCACCTCCAGTCCACTCTCCACCGCCACCAGTTTCATCTCCACCACCTCCAGTCCACTCTCCACCGCCACCAGTTCATTCACCTCCTCCACCCGTTCACTCGCCACCACCCCCTGTACATTCTCCACCCCCACCAATTCACTCTCCACCACCACCAGTTCATTCACCTCCTCCACCTGTACACTCCCCACCCCCTCCAGTTCATTCTCCTCCACCACCAATTCACTCCCCTCCACCACCAGTCAGCTCTCCACCACCGCCCGTACACTCTCCTCCTCCACCAGTTTATTCACCACCACCACCCGTTTTCTCACCACCTCCACCGGTCCATTCTCCACCACCACCTACACCAACTGCATCACCTCCTCCTCCTGTTTATGCACCACCTCCGGAATTTGATGATATTGTTCTTCCCCCTAACTTTGGTTCTTCATATGCTTCACCCCCTCCACCGATCATTGCTGGATACTAA 2721 0.4473 MRASGYFLFFSFFLFSSTSFLSHALSNEEVSFIARRQLLHLHENEDLPENYTDNYTTDLTFPHPGLKRAYIALQAWKKAMYSDPLNSTADWVGPDVCSYHGVFCAPSLNDSNIEVVAGIDLNHADIAGYIPSEFGLLTDLALLHINSNRFCGIIPKSFSKLILLYELDISNNRFVGTFPTPVLSIPDIKFIDLRYNDFEGEIPSELFNKQLDAIFLNNNRFTSTIPENLGSSPASVVVLANNHLSGCIPASIGEMKNTLNEFVILNNNLTGCLPSDIGKLENVTVFDVSENVFVGVLPRTFKGLKNVEKLSIAHNKLTGFVPRSVCTLSSLVNFTFSYNYFNGEEEGCVPPRKDIWLNDKYNCIPDRPRQKATNDCNVVISKPVDCSKAQCGGSGSGNGNGNGSGSGSGSGTGSGSSGSGSGTPSQSNSPPSDQKETPTPSTPSVPKPDPKSSPSNPPSENPTPSVPKPQPQPTPSPSKPEPKPTPSSPSNPSPNPNPTPTPSTPKPKPTPSPSNPPPSEKPTPTPQPKPTPSSPSNPPSSEKSEPEPEPKPQPKPTPSPPSNQPPSEKPQPEPSPPPSPKAEPPPDDDPHHEAPKRRTRSPPPPLYSPPPPVHSPPPPTVHSPPPLVHSPPPPVHSPPPPVNSPPPRVNSPPPPVNSPPPPVHSPPPPVNSPPPPVHSPPPPVNSPPPPVHSPPPPVNSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPVSSPPPPVHSPPPPVSSPPPPVHSPPPPVHSPPPPVHSPPPPVHSPPPPIHSPPPPVHSPPPPVHSPPPPVHSPPPPIHSPPPPVSSPPPPVHSPPPPVYSPPPPVFSPPPPVHSPPPPTPTASPPPPVYAPPPEFDDIVLPPNFGSSYASPPPPIIAGY 906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02718 906 MobiDBLite consensus disorder prediction 600 885 - -
Car05g02718 906 Gene3D Ribonuclease Inhibitor 69 352 IPR032675 -
Car05g02718 906 PRINTS Proline rich extensin signature 442 454 - -
Car05g02718 906 PRINTS Proline rich extensin signature 457 473 - -
Car05g02718 906 PRINTS Proline rich extensin signature 477 489 - -
Car05g02718 906 PRINTS Proline rich extensin signature 489 510 - -
Car05g02718 906 Pfam Leucine rich repeat 282 339 IPR001611 GO:0005515
Car05g02718 906 MobiDBLite consensus disorder prediction 441 543 - -
Car05g02718 906 MobiDBLite consensus disorder prediction 395 440 - -
Car05g02718 906 MobiDBLite consensus disorder prediction 551 583 - -
Car05g02718 906 SUPERFAMILY L domain-like 73 357 - -
Car05g02718 906 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 763 903 - -
Car05g02718 906 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 665 768 - -
Car05g02718 906 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 593 697 - -
Car05g02718 906 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 4 397 - -
Car05g02718 906 MobiDBLite consensus disorder prediction 584 599 - -
Car05g02718 906 MobiDBLite consensus disorder prediction 395 906 - -
Car05g02718 906 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3 665 768 - -
Car05g02718 906 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3 593 697 - -
Car05g02718 906 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3 4 397 - -
Car05g02718 906 PANTHER POLLEN-SPECIFIC LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3 763 903 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02718 Car-Chr5 72281830 72284913 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02718 24 524 Trihelix Transcription Factor Family AT4G33970 53.725 2.29e-172 515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02718 - - gmx:100780677 608.601