Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02711 ATGGCACCAAGTTTTGATTGTGTTTCTAGTCTCCTTTGCACTGAGGATAGCAGTGTTTTTGATGATGCTCAATTTGAGGATACCATGGAAGAGGATTCGTGGCGTCCTAGGTACCAACATCAGACGAACCAAAACCATAGTGTCCCAGATGAGATGCCATTGCAGAGTGAAGAGTGTTTGATGTTGATGTTGGAAAAGGAATGTCAACAATGGCCTGGTTCTGATTACTTGAATAGGTTCAAGTTTGGGGATGATTTGGACTTTGGGGCTAGAAACGAAGCCATCGATTGGATTCAAAAGGTTCAATCATATTTCGGATTTGGTCCTCTATGTGCATATCTATCCATTAATTACATGGATCGATTCCTTTCAGCATATGAATTACCAAAGGGAAGAACTTGGACAATGCAATTGTTGGCTGTATCCTGCTTATCTTTGGCAGCCAAAGTAGAGGAGACCGATGTTCCGCAAACTCTTGATTTACAAGTTGGTGATTCGAAGTTTGTATTTGAAGCTAAAACCATACAGCGAATGGAACTTCTAATACTGACCACATTGAAGTGGAGAATGCAATCAATTACTCCTTTCTCATTCATTGAATATTTCCTTTCTAAGATTAATGATGATCAGAGTTCATTAAGATCTTCAATTTCACAATCTACCCAACTTATAATAAGCACCATTAAAGGTATCGACTTCTTGGAATTCAAACCATCAGAGATTGCAGCGGCAGTTGCAACATGTGTTGTTTCCGAAACCCAAGCAATTGATACTAACAAAGCAATTTCTACTCTGATTCAACACATAGAAAAGGAGAGACTATTGAAGTGTATTGAAAAGGTTCAAGAGTTGTCATTGAACAATGCATCTGTTAAGGATTCAATTGTTGCATCTACTATCCCTTGTGTGCCTCAAAGCCCAATAGGTGTTTTGGATAATACTTTGTGCTTCAGCTACAAAAGTGATGAAACAAATGCTGGTTCATGTTCATCTTCACATAGTAGCCCAGATGCTAAGAGAAGGAAGCCAAACAAAACCTGTGGAGAAGATCTTTTATAG 1059 0.3881 MAPSFDCVSSLLCTEDSSVFDDAQFEDTMEEDSWRPRYQHQTNQNHSVPDEMPLQSEECLMLMLEKECQQWPGSDYLNRFKFGDDLDFGARNEAIDWIQKVQSYFGFGPLCAYLSINYMDRFLSAYELPKGRTWTMQLLAVSCLSLAAKVEETDVPQTLDLQVGDSKFVFEAKTIQRMELLILTTLKWRMQSITPFSFIEYFLSKINDDQSSLRSSISQSTQLIISTIKGIDFLEFKPSEIAAAVATCVVSETQAIDTNKAISTLIQHIEKERLLKCIEKVQELSLNNASVKDSIVASTIPCVPQSPIGVLDNTLCFSYKSDETNAGSCSSSHSSPDAKRRKPNKTCGEDLL 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02711 352 MobiDBLite consensus disorder prediction 335 352 - -
Car05g02711 352 PANTHER CYCLINS 1 345 IPR039361 -
Car05g02711 352 SMART cyclin_7 96 184 IPR013763 -
Car05g02711 352 SMART Cyclin_C_2 193 318 IPR004367 -
Car05g02711 352 MobiDBLite consensus disorder prediction 323 352 - -
Car05g02711 352 Gene3D - 63 280 - -
Car05g02711 352 SUPERFAMILY Cyclin-like 175 286 IPR036915 -
Car05g02711 352 Gene3D - 73 191 - -
Car05g02711 352 Pfam Cyclin, C-terminal domain 193 292 IPR004367 -
Car05g02711 352 ProSitePatterns Cyclins signature. 91 122 IPR006671 -
Car05g02711 352 MobiDBLite consensus disorder prediction 31 50 - -
Car05g02711 352 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 1 345 - -
Car05g02711 352 Pfam Cyclin, N-terminal domain 60 190 IPR006671 -
Car05g02711 352 CDD CYCLIN 91 183 IPR013763 -
Car05g02711 352 SUPERFAMILY Cyclin-like 53 190 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02711 Car-Chr5 72211722 72214310 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02711 63 330 Core Cell Cycle Gene Families AT2G22490 50.000 3.03e-84 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02711 K18810 - gmx:547739 461.455