Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02709 ATGGGTTATCTCTTTTGCAATGCCGATTCTGCCATTGCTACATGCGATCCCCATTATTGGGATCTCAACAAAAGAAAAAACAAATCAATACCAATAACCCGTACCCACACTATCACAGAGTTTCTCTACACCGACATCGTCACCGCCACAAACGCTTTCTCCGCCGAAAGCTACTTAGGTAAAGGCAGCCATGGCAGAGTCTACAGAGCTACCTTAAACACCGTCAAAGGCAACGGAAACCTCGTCGTCGCCGTTAAAACAACAAAGCTAACCAGCAAAAACAAACATAACCACGCAAATGCTAAAAACTGCACCGGTTGCGGTAACTGTACGAGTCCGGTAGAGAACGAGATCGAGATTCTCTCGCAAGTTCCAAGTCCTCGCCTCGTTAACATAATAGGTTACTGTACCGACCCAAACGACAATAAATTAATTGTCGTTGAATACATGCCAAACGGTTCGCTTCACGATCTTTTACATTCAACCACTAGACCGCCCGGTTGGACCAGACGGATCCGGTTCGCTTTACAAGTTGCAAAAGCGGTTCGAACCTTACACGCTTCTAATCCTCCCGTGATTCACCGTGACATTAAATCCTCTAACGTTTTGATCGATAGGGATTGGAAAGCGAGAGTCGGTGACTTTGGTCTCGCACTAAGGGGACACGTGGAGGATGTTCGCGTTAAGTGTACGCCACCCGCGGGTACTTTAGGGTATCTCGATCCTTGCTATCTTGCGCCGGGGGATCTTAGTGCTAAGAGTGATGTGTTCAGTTTTGGGATTCTGTTGTTGGAGATAATCAGTGGAAGGAATGCTATTGATGTTAATTACAGTCCTCCTTCGGTGGTTGATTGGGCGGTTCCTCTTATCAGGCGAGGGGATTTTGCCGGATTATGTGACCGCAGGATTGGAACGCCGTTGGATCAAACAGTGTTGCGGCTGTTGGCGGTGCTTGCAGCAAGATGCGTGAGATCTACGGCGGAGAAACGGCCGGGGATGGTAGAGGTTGTGGAGTGTATTAAACTGGCGAGGAAGAGGATTTCGGAATCTCCGTTATGGAGGAGTCTGAGGCGGCGCGTGGCGCGTGTGGAGAGTGCACAACCGTTGATGAAGTGGGAAGCGtatgattgtgattatgactataataatactaataataattatgattgtgattGGGAAAGGAATGAAGAAGTTGTGAAGATAGTAAAGAGTGGGAGCAGTAGTAGAAGGAAGAGTAAAGTATCGAGTGTGGCGGGTGTAGAGTATGAGAATAAACCCTCAAAGTTAAAGTCAAAGTCAAATAAAGGAGCGAGATCTAAGTCGTCGAAGAAAGTAGCGAGATCCAAGACCATTGGTTCTGTTTCTGGTTGTGTTGGTAGTAGGAGGAGTGGGATTCAAATGGTTTCGGAGAAAACGGGAGGAGTGAGGCTAAAAAAGTCAAAGTCAATGGGGGTGTTGCAAGGCCCTGTTCTTTTGCATCATGATGCAATTAATTGGTGTGATGAGAGTGAGACGATGGCAATGTCGAAGTTGGTGATTTCAGAACATAAGAAGTTGGAGAAAAAAATGCTTGAAAAGCCGTTGGTTCACTCGTATGGTTGGGAATCTGAATAA 1614 0.456 MGYLFCNADSAIATCDPHYWDLNKRKNKSIPITRTHTITEFLYTDIVTATNAFSAESYLGKGSHGRVYRATLNTVKGNGNLVVAVKTTKLTSKNKHNHANAKNCTGCGNCTSPVENEIEILSQVPSPRLVNIIGYCTDPNDNKLIVVEYMPNGSLHDLLHSTTRPPGWTRRIRFALQVAKAVRTLHASNPPVIHRDIKSSNVLIDRDWKARVGDFGLALRGHVEDVRVKCTPPAGTLGYLDPCYLAPGDLSAKSDVFSFGILLLEIISGRNAIDVNYSPPSVVDWAVPLIRRGDFAGLCDRRIGTPLDQTVLRLLAVLAARCVRSTAEKRPGMVEVVECIKLARKRISESPLWRSLRRRVARVESAQPLMKWEAYDCDYDYNNTNNNYDCDWERNEEVVKIVKSGSSSRRKSKVSSVAGVEYENKPSKLKSKSNKGARSKSSKKVARSKTIGSVSGCVGSRRSGIQMVSEKTGGVRLKKSKSMGVLQGPVLLHHDAINWCDESETMAMSKLVISEHKKLEKKMLEKPLVHSYGWESE 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02709 537 Pfam Protein tyrosine and serine/threonine kinase 56 339 IPR001245 GO:0004672|GO:0006468
Car05g02709 537 Gene3D Transferase(Phosphotransferase) domain 1 150 354 - -
Car05g02709 537 PANTHER - 1 496 - -
Car05g02709 537 SMART serkin_6 53 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g02709 537 MobiDBLite consensus disorder prediction 431 445 - -
Car05g02709 537 ProSiteProfiles Protein kinase domain profile. 53 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g02709 537 PANTHER OS01G0750732 PROTEIN 1 496 - -
Car05g02709 537 SUPERFAMILY Protein kinase-like (PK-like) 26 340 IPR011009 -
Car05g02709 537 ProSitePatterns Serine/Threonine protein kinases active-site signature. 192 204 IPR008271 GO:0004672|GO:0006468
Car05g02709 537 ProSitePatterns Protein kinases ATP-binding region signature. 59 86 IPR017441 GO:0005524
Car05g02709 537 Gene3D Phosphorylase Kinase; domain 1 37 149 - -
Car05g02709 537 MobiDBLite consensus disorder prediction 425 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02709 Car-Chr5 72189060 72191284 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02709 41 351 Receptor kinase-like Gene Family AT3G59420 38.608 3.96e-62 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Car05g02709 PK_Tyr_Ser-Thr 2e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02709 - - cam:101503747 1014.6