Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02698 ATGAAAGGAGAAGAATACATAGAGCAACATTCAAATCCTAAAGGAAGTGAAATTCAAACCCCACCTTCTTTATTATTCTCAAAGCTTCATCAATCACAACCATTTCCTCACAATCCTTACCAACTCTCCAATCAATGTCAAACGATCGCTACTGATGACGACAATAACCGCACCGGAGGAGGTGCAACCGCCAACAAACAGAATTCCTCCGGCGATGGCGCCACAATCGAAGTCATTAGACGGCCGAGAGGACGTCCGCCTGGTTCCAAAAACAAACCGAAACCGCCAGTTATCATAACACGCGATCCTGAACCTGCTATGAGTCCTTTTATTCTAGAAGTTTCTGGTGGAAACGACGTCGTTCTAGCTATTGCACAGTTTAGTCGCCGGAAGAATATAGGTTTATGTGTGTTAACCGGTTCAGGAACCGTCGCTAACGTTACTCTCCGTCAACCTTCGACTACGCCTGGAGCTACTGTTACTTTTCACGGACGTTTTGATATTTTATCTGTAACCGCTACTTTTCTTCCTCAACAATCTGGTGCTTCTCCAGCGGTTCCTAGTGGCTTTTCAATCACGCTCGCCGGACCTCAGGGACAGATCGTCGGAGGTTTGGTTGCCGGAAACTTGATAGCGGCGGGAACGGTGTATGTTATCGCTGGTTCTTTCAATAATCCTTCGTATCATAGGTTACCGATGGAGGAAGAAGTTCGGAACTCGGAGTCCGGTGGTGATGGAAATTCGGCAAATGTTTCCGGTGCGGTGGATAGCGGTCAAGGTCAGGGTGAATCGTGTGGGATGTCTATGTACAGCTGTCACTTGCCGTCCGATGTGATTTGGGCTCCACCAGCAAGACCACCACCTTACTGA 870 0.4782 MKGEEYIEQHSNPKGSEIQTPPSLLFSKLHQSQPFPHNPYQLSNQCQTIATDDDNNRTGGGATANKQNSSGDGATIEVIRRPRGRPPGSKNKPKPPVIITRDPEPAMSPFILEVSGGNDVVLAIAQFSRRKNIGLCVLTGSGTVANVTLRQPSTTPGATVTFHGRFDILSVTATFLPQQSGASPAVPSGFSITLAGPQGQIVGGLVAGNLIAAGTVYVIAGSFNNPSYHRLPMEEEVRNSESGGDGNSANVSGAVDSGQGQGESCGMSMYSCHLPSDVIWAPPARPPPY 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02698 289 MobiDBLite consensus disorder prediction 242 262 - -
Car05g02698 289 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 17-RELATED 27 288 - -
Car05g02698 289 MobiDBLite consensus disorder prediction 235 262 - -
Car05g02698 289 CDD DUF296 109 223 IPR005175 -
Car05g02698 289 SUPERFAMILY AF0104/ALDC/Ptd012-like 106 235 - -
Car05g02698 289 Pfam Plants and Prokaryotes Conserved (PCC) domain 109 225 IPR005175 -
Car05g02698 289 ProSiteProfiles PPC domain profile profile. 104 244 IPR005175 -
Car05g02698 289 MobiDBLite consensus disorder prediction 1 102 - -
Car05g02698 289 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 27 288 IPR014476 GO:0003680
Car05g02698 289 Gene3D - 108 241 - -
Car05g02698 289 MobiDBLite consensus disorder prediction 12 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02698 Car-Chr5 72092394 72094127 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02698 72 289 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 66.812 5.40e-97 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02698 - - gmx:100788098 418.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02698 05 72092394 72094127 Car05g02698 05 72092394 72094127 ECH