Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02694 ATGAACACAAACAGAGCCGAAGCAGAACGTTTACTAGAAATCGGAGAAGAACTATTACAAAAACGAGATCTTAAAGGTTCAAGAGAATTAGCCATTCTAGTTCAAGAAACCGAACCTCTTCTAGAAGGTTCCGACCAGATCCTAGCAATCGTCGACGTCCTCGAAGCAGCCGAAAAGCCTCTCAATCTCAACAACCACCACCTCGATTGGTACGCTATTCTCCAAATCAATCGAAGTTCTCAAGATCTAAATCTCATCAAGAAACAGTATCGTACACTCGCGCTTCTCCTTCACCCTGATAAGAACCCTTTTTCCTTCGCCGAACTCGCTTTCAAACTTGTTTCTGATGCTTGGGCCGTTTTATCTGATCCGGCCCAAAAGGCCCAATATGATAAGGGGTTTGAATTTGAAAACGACGGTGCTTTGTGTTTGGAGGTTTTTTGGACCGCGTGTCCTTATTGTTATCGTTTGTATGAGTATGCTAAGGTTTATGAGGGATGTTGTTTAATGTGTCAGAATTGTGACAAATCGTTTCATGGTGTTTCGATTCCGTCTCTTCCGCCGATTGTTCCTGGACAAGAAGCTTATTATGTTTCTTGGGGGATGTTTCCGATGGGTTTTGTTTTTGAAAATTTAGGAAATGGTGGTGATGTTGTTGCTTCTGCTACGCGGAAACGATAG 681 0.4273 MNTNRAEAERLLEIGEELLQKRDLKGSRELAILVQETEPLLEGSDQILAIVDVLEAAEKPLNLNNHHLDWYAILQINRSSQDLNLIKKQYRTLALLLHPDKNPFSFAELAFKLVSDAWAVLSDPAQKAQYDKGFEFENDGALCLEVFWTACPYCYRLYEYAKVYEGCCLMCQNCDKSFHGVSIPSLPPIVPGQEAYYVSWGMFPMGFVFENLGNGGDVVASATRKR 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02694 226 PRINTS DnaJ domain signature 71 89 IPR001623 -
Car05g02694 226 PRINTS DnaJ domain signature 90 105 IPR001623 -
Car05g02694 226 PRINTS DnaJ domain signature 106 126 IPR001623 -
Car05g02694 226 ProSiteProfiles dnaJ domain profile. 69 134 IPR001623 -
Car05g02694 226 Pfam DnaJ domain 69 131 IPR001623 -
Car05g02694 226 ProSitePatterns Nt-dnaJ domain signature. 111 130 IPR018253 -
Car05g02694 226 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 1 213 - -
Car05g02694 226 CDD DnaJ 69 123 IPR001623 -
Car05g02694 226 SUPERFAMILY Chaperone J-domain 65 133 IPR036869 -
Car05g02694 226 SMART dnaj_3 68 126 IPR001623 -
Car05g02694 226 Gene3D DnaJ domain 55 142 IPR036869 -
Car05g02694 226 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02694 Car-Chr5 72028715 72029867 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02694 2 219 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 53.617 2.45e-82 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02694 - - mtr:MTR_3g100330 392.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01197 02 36248682 36251359 Car05g02694 05 72028715 72029867 PCT