Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02691 ATGGTGTACCCAGGTTCAGTGCAATTTTCTCGCGACGTTAGGCTCAACAATAATAATGGACTACGTAATTTTCAGCATCATAATCCGGCGCGGGTTGGTCGATTACATTTGGTCACTATGAATCTTCTACCGCGTACTTTGAAGCAAGATTCTTTGGCACTCCATCTTTTGAGTGGAGTACATGCCCCAATAAGGCACGCACCTTCCAGGTACAGTGTTTTCGTATGTCGGTCTGCCATGATACCAGGTGGAGGGAGCGGGACTGCCCTCGTGAAATCTGCTAGTGTTATTTTAACAAGGTCATATAATTCTTTACTGGGAAGCCCTATTTTGCTTCGATTGATCCCAGCTCTTGGTATTATTGCCTTTGCTGTTTATGGTCTTGAGCCATTCCTCCGTCTCAGCAGGATTCTATTTCTTCAAAGGACCGACAGTAGTTGGAAGAAAAGTAATTCACGCTATATAATGACATCTTATTTTCAGCCATTATTGTTGTGGACTGGGTCAATGCTCATATGCAGGGCATTAGATCCAATAGTCTTGCCATCTGAGACTAGCCAGGTCGTGAAGCAACGGCTACTTAATTTTGTGAGATCTTTGTCAACAGTGATTTCATTTGCTTACTGTTTATCAAGCTTAATTCAACAAGCTCAAAAATTCTTTCTGGAGGCAAATGACAACAGTGATGCAAGAAATATGGGCCTTGATTTTGCTGGGAAGGCAGTATACACTGCTGTATGGGTTGCTGCTGTGTCATTGTTCATGGAGTTGCTAGGTTTCTCCACACAGAAGTGGTTAACTGCTGGTGGTTTGGGCACAGTATTACTCACTCTTGCCGGTCGTGAGATATTTACAAACTTTCTTTCAAGTATAATGATCCATGCAACTCGGCCATTTATATTGAATGAGTGGATTCAAACAAAGATTGAAGGATATGAGGTTTCAGGCACAGTTGAGCATGTAGGCTGGTGGTCACCAACCATTATTAGAGGTGATGATCGTGAGGCAGTTCATATTCCTAATCATAAGTTTACTGTGAATGTTGTGAGAAATCTGAGTCAGAAATCTCATTGGCGTATCAAGAGTTACATTGCTATCAGTCACTTTGATGTTAACAAAATTAATAGTATTGTAGCTGATATGCGCAAGGTTTTAGCAAAAAATCCTCAAGTGGAGCAGCAGAAATTGCACAGAAGGGTCTTTTTAGAAGACATCAGTCCTGAAAACCAGGCTCTGAAGATATTGATATCGTGCTTTGTGAAAACTTCACATTTTGAGGAGTACCTATGTGTTAAGGAGGCAATCCTTTTGGATCTTCTCAGAGTTGTCAGTCATCATCGAGCCCGGTTAGCCACTCCCATCCGCACAGTTCAGAAAGTATACAGTGAGCCTGCCTCGGAAAATATACCCTTTGGGGATACCATTTTCACTCGATCCAGAGCAACAGTAAATCGCCCATTCTTGCTGATAGAACCGCCATATAAAGTTAATGGTGAAGAAAAAGCTAAGCCATCAACTCGTTCAACTCGTGGAAATGAGGAAAAAGATGCCAAGATTGATGAACCTGTAGCATCTGACTCCAAAAGCGATGATAATTTTGCAGGAACATCAACCTCTCCACATGGTGTAAACTCCAAGGATAAATCCAAGTCAAATTCTGATGCCCAAATCCAGAACATGGGTTCCGACAATTCAGTGGAGAAGTCCTCCAAAATCACACAGCCTAAAAAAGAAAGTTCAGGGGATGTAGGAAAGGGAAGTACAATACCTGTATCTAAAAACCTTGCACAAAGTGTTGTATCTGAAACTTCACCTGTTACTTCCCCCCATGAGTCTGGCAGGGGAGAGACTGCTTCTACCACTTCTTCACAGTCAAAGCAAGACGAAGATAAATCTTCGGTGCCATCATCATCAGTTAGGCCGGCCTTAGAAGAGAACATTCTTCTTGGGGTTGCACTTGAAGGCTCAAAACGAACTCTTCCAATTGAGGAAGAAATGAGTCCATCTCTGAACTCAGCCGAGTCACAAGAATTTGCTGTCCAACGGAATGGGAATGGACCTCCGGCTAACAAAGATAAGAAGGATGGTCCAATGTCTTCATTTCCAAATGCTAAGCAAAATGACTAG 2127 0.4241 MVYPGSVQFSRDVRLNNNNGLRNFQHHNPARVGRLHLVTMNLLPRTLKQDSLALHLLSGVHAPIRHAPSRYSVFVCRSAMIPGGGSGTALVKSASVILTRSYNSLLGSPILLRLIPALGIIAFAVYGLEPFLRLSRILFLQRTDSSWKKSNSRYIMTSYFQPLLLWTGSMLICRALDPIVLPSETSQVVKQRLLNFVRSLSTVISFAYCLSSLIQQAQKFFLEANDNSDARNMGLDFAGKAVYTAVWVAAVSLFMELLGFSTQKWLTAGGLGTVLLTLAGREIFTNFLSSIMIHATRPFILNEWIQTKIEGYEVSGTVEHVGWWSPTIIRGDDREAVHIPNHKFTVNVVRNLSQKSHWRIKSYIAISHFDVNKINSIVADMRKVLAKNPQVEQQKLHRRVFLEDISPENQALKILISCFVKTSHFEEYLCVKEAILLDLLRVVSHHRARLATPIRTVQKVYSEPASENIPFGDTIFTRSRATVNRPFLLIEPPYKVNGEEKAKPSTRSTRGNEEKDAKIDEPVASDSKSDDNFAGTSTSPHGVNSKDKSKSNSDAQIQNMGSDNSVEKSSKITQPKKESSGDVGKGSTIPVSKNLAQSVVSETSPVTSPHESGRGETASTTSSQSKQDEDKSSVPSSSVRPALEENILLGVALEGSKRTLPIEEEMSPSLNSAESQEFAVQRNGNGPPANKDKKDGPMSSFPNAKQND 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02691 708 MobiDBLite consensus disorder prediction 529 569 - -
Car05g02691 708 MobiDBLite consensus disorder prediction 496 527 - -
Car05g02691 708 Gene3D - 164 297 - -
Car05g02691 708 Pfam Mechanosensitive ion channel 240 447 IPR006685 GO:0016020|GO:0055085
Car05g02691 708 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 2, CHLOROPLASTIC 1 700 - -
Car05g02691 708 Gene3D - 299 354 IPR023408 -
Car05g02691 708 MobiDBLite consensus disorder prediction 576 640 - -
Car05g02691 708 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 1 700 IPR045042 -
Car05g02691 708 MobiDBLite consensus disorder prediction 665 683 - -
Car05g02691 708 MobiDBLite consensus disorder prediction 495 708 - -
Car05g02691 708 SUPERFAMILY Sm-like ribonucleoproteins 283 353 IPR010920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02691 Car-Chr5 71999634 72007434 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02691 26 680 Mechanosensitive Ion Channel Family AT1G58200 55.639 0.0 723
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02691 K22047 - gmx:100796022 1077.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02691 05 71999634 72007434 Car05g02691 05 71999634 72007434 ECH