Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02686 ATGCCAGAAAAAAACTCCAACAAAGTTCCGTTCTCAGAAAACGATATTGCTACTCTCGTACAACGGTATGACGCAACGATATTGTTGACGTTGCTTCAGGAAATAGCACATTACCATGACACGAAGAAGTTTGATTGGAATGAATTGGTGAAGAAAACATCCACCGGAATTTCTAATCCCAGAGAATATCAGATGTTATGGCGCTACTTAGCGTATCATGATTCCTTGAATCAAATTTTTGAAGAAGCTGATCAACCTGTGGATGATGATAGTGACCTAGACTGCGAGCCAGAATCATTAGCTTCTGTAAGTGTGGAGTCTGCATCAGAGTCCTCAGCTTGTGTGAAGGTCATGATTGCTTCCCGTACTCTAAGTGAATCTACCCCTAGTAGCTCAACAATTGAGGCTCCATTGACTGTATATCTTCCAGTTTGTTGTTCATCTAGAACTCCTAAGGAAAATTCACAGCCATCTGATTTGATGGGACAGGCAAGCATTAGTTTCCCAGTTACCGTTCATAGACAGACACTGCCAACTGTATCATCAACTGATGCTTTAGAAACCAAGGGATTAGTTGGTGGTACCATGGCTTCCAAAAGGAAAAGAAAAGCTTGGTCAGAGGAAGAGGACAATCTGCTACGAGCTGCTGTTCAGCGATTGGGTGAAGGGAATTGGGCAACCATGGCAAAAGGAGATGACTTTCCTGTTAAGAGAAGTGCAACGCAATTGGCTCAGAGGTGGAGCACTTTACGAAAGAAAGACTGCAGTACTAATACAGGAACAAACGTGACCAACACACAGTATACTACTGCTGAACAGTTGGCTACTCGTCACTCCTTATCATTAGCCCTTGACATGCCATTCAAAAAGTTAACTGCTCCTGGAATGACTAATCCTAATCCTGGTAGGACATCCACATCAATTAAAAATCAAGTGCAGTCTCGTAATGCTACAGAAGTTTCCACAGTTCGTAGTTCTGTTCCAGCTCAGCGTCCATCTCAACAAGCTGTGTTGGGATCATGTGGTTCTCCTGCAAAATCCAAACTAGCCTCTGAAAGTTCAGTCTCTAAGTGTAACACAATTCCAGGTCCATCTCAACAAGCTGTGTTGGGATCCTGTGGTTCCCCTGCAAAATTCAAATTAGCCTCTGAAAATCCAGTCTCTAAGTGTAATGCGATTTCAGGGCGTGAGTTAAAACCTGCCATAGTTCATTCTGGAGCACAAACTGTTTCACGACCAAATACACTAACTGTTTCGCGACCAAATGCACCAACTGTTTCGCGACCAAATACTCTACCACAATTTAAGGTTGCTCAAGCGAAAAATGTGGTACATCCTGTGCCTGCTGGTAGTTCTTTGACAAAGACACCCATTTCTGCTGGTTTGCCTTCTGTCCAAAAGGATAAACATGTTACATCTGTGCAAGAAGAGGTTAAAAGAGTTTCTGATCTTGGCTCCACACCGAAAGAAAAGGTGAAAGAAGAGGAAACTTCTGCGTTGACTACTCAGAGCCAGGTAGATAGCAAATTGGATAAGGCAAAGTTAGAATTAGATAAGGCCAAAAGCATGCCCGGTGAGAAAATTTTGGAAAATAAAGTAGTAGTCTCACAAAATCCAAGAGGGTGTGAAGAGCAAGGAAGTGTTCAGAATTCAAATTTGATTCCTAAGAAGGCAGCCACCGAGAATGGAAATGACAaagtcaataaggaaagtcaagttcaaaatcaagacaagaagacgaattcaagtAATGGAAGTTCTAACCAACAAAACATGCATCAGAAACAAGTACATTTGCCAAAACAAGATGAACGCCTTCAAGGTTTGGAACAGCCGAAATAG 1842 0.4121 MPEKNSNKVPFSENDIATLVQRYDATILLTLLQEIAHYHDTKKFDWNELVKKTSTGISNPREYQMLWRYLAYHDSLNQIFEEADQPVDDDSDLDCEPESLASVSVESASESSACVKVMIASRTLSESTPSSSTIEAPLTVYLPVCCSSRTPKENSQPSDLMGQASISFPVTVHRQTLPTVSSTDALETKGLVGGTMASKRKRKAWSEEEDNLLRAAVQRLGEGNWATMAKGDDFPVKRSATQLAQRWSTLRKKDCSTNTGTNVTNTQYTTAEQLATRHSLSLALDMPFKKLTAPGMTNPNPGRTSTSIKNQVQSRNATEVSTVRSSVPAQRPSQQAVLGSCGSPAKSKLASESSVSKCNTIPGPSQQAVLGSCGSPAKFKLASENPVSKCNAISGRELKPAIVHSGAQTVSRPNTLTVSRPNAPTVSRPNTLPQFKVAQAKNVVHPVPAGSSLTKTPISAGLPSVQKDKHVTSVQEEVKRVSDLGSTPKEKVKEEETSALTTQSQVDSKLDKAKLELDKAKSMPGEKILENKVVVSQNPRGCEEQGSVQNSNLIPKKAATENGNDKVNKESQVQNQDKKTNSSNGSSNQQNMHQKQVHLPKQDERLQGLEQPK 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02686 613 Gene3D - 195 259 - -
Car05g02686 613 SMART sant 201 253 IPR001005 -
Car05g02686 613 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 197 255 IPR017930 -
Car05g02686 613 SUPERFAMILY Homeodomain-like 200 253 IPR009057 -
Car05g02686 613 MobiDBLite consensus disorder prediction 452 469 - -
Car05g02686 613 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 366 472 - -
Car05g02686 613 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 476 611 - -
Car05g02686 613 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 2 368 - -
Car05g02686 613 MobiDBLite consensus disorder prediction 297 345 - -
Car05g02686 613 MobiDBLite consensus disorder prediction 293 345 - -
Car05g02686 613 Pfam Myb-like DNA-binding domain 202 250 IPR001005 -
Car05g02686 613 MobiDBLite consensus disorder prediction 407 429 - -
Car05g02686 613 MobiDBLite consensus disorder prediction 448 510 - -
Car05g02686 613 MobiDBLite consensus disorder prediction 470 497 - -
Car05g02686 613 MobiDBLite consensus disorder prediction 565 596 - -
Car05g02686 613 MobiDBLite consensus disorder prediction 597 613 - -
Car05g02686 613 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 2 368 - -
Car05g02686 613 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 476 611 - -
Car05g02686 613 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 366 472 - -
Car05g02686 613 MobiDBLite consensus disorder prediction 538 558 - -
Car05g02686 613 MobiDBLite consensus disorder prediction 537 613 - -
Car05g02686 613 CDD SANT_TRF 203 252 - -
Car05g02686 613 ProSiteProfiles Myb-like domain profile. 197 251 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02686 Car-Chr5 71952046 71959179 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Car05g02686 Myb_DNA-binding 2.4e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02686 - - mtr:MTR_3g100180 591.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02686 05 71952046 71959179 Car05g02686 05 71952046 71959179 ECH
Car02g01203 02 36401300 36407724 Car05g02686 05 71952046 71959179 PCT