Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02671 ATGATTATTATGAGGAAGAAAAGGAAAGGAAGTGAGACGGATGCATCTACGGATCTGCGTGATGTTATTTTGCCTTTGGAACATGGTTCTGTTGGGTCGTCGATTTTGAAGTCTCATTACTCGCTAGAAGATTGTTGTAGGTTGAAGAAAAGGTGTAAAGAAAATGCTGACACTGAAGCTGCTAGTTCCTTTAAAAGTAGGCTTGCTGGCATTGCTACTGCGCCGCCATGTGGGACGTCATCTTTGGTCACGCGGGGTAGAGGTCTCAAGAGGAAGATAGGTTGCATTGATGTTGCTACTCAGATGGGCAGGAAGAAGAAGATTGAGGATGATTATGTTTCTGGTGAATCGATTGGGCAAGGGAAATTTGGATCGGTTTATTTGTGTAGGTCTAGGGTTAGTGGAGGAGAATATGCATGCAAAACTCTGAAGAAAGGGGAGGAGACAGTTCACCGTGAGGTTGAGATAATGCAACACTTGTCTGGACATTCTGGGGTGGTGACACTGTTAGCAGTTTATGAAGAAGCTGAATGCTTTCATCTTGTGATGGAATTGTGTTCTGGGGGACGGCTGATTGATCAAATGGTTAAGGACGGTCCGTATTCGGAACAACGGGCTGCTAACATACTCAAGGAAGTGATGTTAGTCATCAAGTATTGTCATGACATGGGAGTTGTGCACAGAGATATCAAACCCGAGAATATTCTGCTCACAAAATCAGGAAAATTAAAGCTTGCCGATTTTGGACTTGCCATGAGAATTTCAGAAGGTCAAAACTTGACTGGATTGGCTGGAAGCCCTGCATATGTTGCCCCCGAAGTATTGTCGGGCAGCTACTCTGAGAAGGTTGATATATGGAGCGCTGGAGTGCTCCTGCACGCTCTGTTGGTTGGCTGTCTTCCATTCCAGGGAGATTCATTGGAAGCTGTTTTTGAGGCCATTAAGACTGTCAAATTAGATTTGCAAGTAGGGATGTGGGAATCGATATCTAAACCAGCACGGGATCTTGTTGCGAGAATGCTGACAAGGGATACTTCTTCCAGGATATCAGCTGAAGAAGTACTCAGGCACCCATGGATATTGTTCTACACTGCTAACTCATTAACAATGCTGCCCATCAAAACAAAATTGAAGAATCAAATTGGTGCCACATGCAAACAGCTTGTCACCGCACCAGAACCTAGGTTAGGAGGAAACATGATAGATAACGGCTCACTTAGCGAGCTATCATCCTCTGAAAGTTGCAATTCAGATGATCAGGATGAATGTGTGTTGATTGATGCACTTGCAACTGCAATTTCACATGTGAGGATATCAGAACCAAAAAGGAGCAGGTTGTGTAGTCCGACTGGCCCCATAGTTCAGCAAGGTTCATCTAACATGAAGGCTAACAACCTCTGTAAAGCATTTTGA 1413 0.4423 MIIMRKKRKGSETDASTDLRDVILPLEHGSVGSSILKSHYSLEDCCRLKKRCKENADTEAASSFKSRLAGIATAPPCGTSSLVTRGRGLKRKIGCIDVATQMGRKKKIEDDYVSGESIGQGKFGSVYLCRSRVSGGEYACKTLKKGEETVHREVEIMQHLSGHSGVVTLLAVYEEAECFHLVMELCSGGRLIDQMVKDGPYSEQRAANILKEVMLVIKYCHDMGVVHRDIKPENILLTKSGKLKLADFGLAMRISEGQNLTGLAGSPAYVAPEVLSGSYSEKVDIWSAGVLLHALLVGCLPFQGDSLEAVFEAIKTVKLDLQVGMWESISKPARDLVARMLTRDTSSRISAEEVLRHPWILFYTANSLTMLPIKTKLKNQIGATCKQLVTAPEPRLGGNMIDNGSLSELSSSESCNSDDQDECVLIDALATAISHVRISEPKRSRLCSPTGPIVQQGSSNMKANNLCKAF 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02671 470 CDD STKc_CAMK 111 359 - -
Car05g02671 470 ProSitePatterns Protein kinases ATP-binding region signature. 118 141 IPR017441 GO:0005524
Car05g02671 470 PANTHER SERINE/THREONINE-PROTEIN KINASE 29 462 - -
Car05g02671 470 SMART serkin_6 112 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g02671 470 SUPERFAMILY Protein kinase-like (PK-like) 103 377 IPR011009 -
Car05g02671 470 PANTHER SERINE/THREONINE-PROTEIN KINASE PEPKR2 29 462 - -
Car05g02671 470 ProSitePatterns Serine/Threonine protein kinases active-site signature. 225 237 IPR008271 GO:0004672|GO:0006468
Car05g02671 470 Gene3D Transferase(Phosphotransferase) domain 1 103 405 - -
Car05g02671 470 Pfam Protein kinase domain 112 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g02671 470 ProSiteProfiles Protein kinase domain profile. 112 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02671 Car-Chr5 71705480 71709558 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02671 96 359 EF-hand Containing Proteins AT2G38910 42.545 4.73e-77 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Car05g02671 Pkinase 1.7e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02671 - - gmx:100812729 801.201