Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02664 ATGAACACTTTTCCACCCAAACTATACTTCAATTTCAATTATGTCTACCCCTACTTCCTCCTCCTTCTTTTCACACCGCCGGCAACGCCGCAGATCCCCAACGCGCTCTCACCACCACCGGCAGACAGAATTTCAACTCTCAAATTCGACAAGTCCATGGCCATAGTTCTAATTATCTTAATCGTCGTGTTTTTAATCCTCGGTTTTCTCTCCGTCTACACTCGCCAGTGCACAGAACAGAGGATGAGAGGAAGGTTCGACCTTACTATTCCGATCGCAGGAAGTCACCGGAGACACCGCGGACTCGACAAGGAAATCATCGAAACGTTTCCTACCTTTGTTTACTCCGCCGTGAAGGGACTCAAAATTGGAAGAGCCGCGCTAGAATGCGCCGTGTGTTTAAACGAATTTCAAGACGACGAAACGCTGCGTTTGATCCCTAATTGTTGCCACGTGTTTCATTCTGAATGCATCGATGCTTGGCTTGTTAATCACTCTTCGTGTCCGGTTTGTCGTGCAAATTTAATTCCAAAACCTGGAGAAACCTCTTTCGTAACGATTCACATTCCGGATCCTAATATACCCGATTCAGATGACCCGACCCGGAACAACTTAAATGGCGTTGACACCCCTGACCGAGCTACAGTTActtcttcttcttcttcttctcctAAAGTGAACTATTCGGTCTCACCGAACCCGGTCCGACCGGTACGGTCAAGGTCAACAGGGTTGAGAATTGGGAACTGGTTTCCGCGGTCGCATTCAACGGGACACTCGCTGGTTCAAGAAGGAGAGAACCACGAGCGATTCACTTTGAGATTACCGGAGGAGGTGAGGAACCGGTTAGTGAATTCTACGCTGAGCCGAACGACAAGTTGTGGTGTTAGTTTTACTCCGGAGGGTAGTGGGAGGAGGGGTTATAGAACGAGAAGTGTGGGAAGTAGTGCTCCTGGGAGGAACTATGAGTGGTTTAATCGGCCGGACCGGAGGGGGTTCTCTTGGACTCCACCGTTTGTGGGTCGAACCAGTTTGAGTTGGTTGAAGAATAAGTCACCCGGGAAATTGGATGACGTGGGAGAACGGTCTTCTGATCGTTTGTTTGCAGGGTGTTCTGGAGATCATTTTTTTTCTATATGTGGTTGTAGAATTTGGAttattttttatttatttatttattAA 1182 0.4653 MNTFPPKLYFNFNYVYPYFLLLLFTPPATPQIPNALSPPPADRISTLKFDKSMAIVLIILIVVFLILGFLSVYTRQCTEQRMRGRFDLTIPIAGSHRRHRGLDKEIIETFPTFVYSAVKGLKIGRAALECAVCLNEFQDDETLRLIPNCCHVFHSECIDAWLVNHSSCPVCRANLIPKPGETSFVTIHIPDPNIPDSDDPTRNNLNGVDTPDRATVTSSSSSSPKVNYSVSPNPVRPVRSRSTGLRIGNWFPRSHSTGHSLVQEGENHERFTLRLPEEVRNRLVNSTLSRTTSCGVSFTPEGSGRRGYRTRSVGSSAPGRNYEWFNRPDRRGFSWTPPFVGRTSLSWLKNKSPGKLDDVGERSSDRLFAGCSGDHFFSICGCRIWIIFYLFIY 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02664 393 Pfam Ring finger domain 129 172 IPR001841 -
Car05g02664 393 SMART ring_2 130 171 IPR001841 -
Car05g02664 393 PANTHER RING-H2 FINGER PROTEIN ATL11 9 301 - -
Car05g02664 393 MobiDBLite consensus disorder prediction 190 241 - -
Car05g02664 393 PANTHER RING FINGER DOMAIN-CONTAINING 9 301 - -
Car05g02664 393 ProSiteProfiles Zinc finger RING-type profile. 130 172 IPR001841 -
Car05g02664 393 MobiDBLite consensus disorder prediction 295 314 - -
Car05g02664 393 SUPERFAMILY RING/U-box 129 180 - -
Car05g02664 393 CDD RING-H2_PA-TM-RING 129 172 - -
Car05g02664 393 MobiDBLite consensus disorder prediction 197 238 - -
Car05g02664 393 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 92 177 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02664 Car-Chr5 71623173 71624537 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02664 9 343 Rapid Response to Elicitors AT3G05200 37.752 4.74e-57 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02664 K10664 - gmx:100805815 355.525