Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02663 ATGGCACTTGAAACTGTGGTTTTCCCACAAGATCCATTCACATATAATAATTACTTGTATTCGTTGGTGGGAGAAGCTGGTGAAGAACAAGAGAATGTTCTTCTAGGAATTATCAATAACAACAACGTAGGACAGAATCAAAATGAACATGCAAATTGGGATTCTTGTTCACACTCTTCCTCTCCTGAAGTTTGCACTGTTGATCAAACTCTTTCTTCCACCGTGGAAGCTACTGTGGGAAGGAGAAAACGACGTCGTACTAAGAACACAAAGAATAAGGAGGAAATTGAAAACCAGAGGATGACTCACATTACAGTTGAACGCAATCGTCGAAAACAAATGAATCACTATTTGAATGTGCTTCGATCATTGATGCCTTCTTCTTATGTTCAAAGGGGTGACCAAGCATCAATAATTGGGGGTGCAATAAACTTTGTGAAGGAATTAGAACAGCTTTTACAGTCCATGGGGGGCCAAAACAAAACCAAACAAATAGGCTTAAATGGAACACCTTTTGCTGAATTCTTCACTTTTCCTCAGTACACAACAGGTGCAACTCAGAGTAACACACTCACTATGGAACAACACAAACAATGGGCAGTGGCAGATATTGAAGTCACCATGGTTGATACTCATGCCAACATCAAGATACTTTCCAAGAAACAAACAGGACAGCTTATGAAGATTGTTCTTGGCTTACAAACTCTTAGGCTTACTATTCTTCACCTCAATGTTACCACTCTGGCTGATATGGTTCTTTTTTCACTTAGTGTCAAGGTAGAGGAGGGGAGTCAGCTGAACACTGTGGATGAAATTGCGGCTGCTGTGAATCAACTTTTACGGACGGTTCAACAAGAATTGGCTTTTCATCTAaattga 879 0.3993 MALETVVFPQDPFTYNNYLYSLVGEAGEEQENVLLGIINNNNVGQNQNEHANWDSCSHSSSPEVCTVDQTLSSTVEATVGRRKRRRTKNTKNKEEIENQRMTHITVERNRRKQMNHYLNVLRSLMPSSYVQRGDQASIIGGAINFVKELEQLLQSMGGQNKTKQIGLNGTPFAEFFTFPQYTTGATQSNTLTMEQHKQWAVADIEVTMVDTHANIKILSKKQTGQLMKIVLGLQTLRLTILHLNVTTLADMVLFSLSVKVEEGSQLNTVDEIAAAVNQLLRTVQQELAFHLN 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02663 292 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 98 149 IPR011598 GO:0046983
Car05g02663 292 Pfam Helix-loop-helix DNA-binding domain 99 150 IPR011598 GO:0046983
Car05g02663 292 PANTHER MAX DIMERIZATION, MAD 1 287 - -
Car05g02663 292 SMART finulus 104 155 IPR011598 GO:0046983
Car05g02663 292 PANTHER HELIX-LOOP-HELIX-LIKE PROTEIN 1 287 - -
Car05g02663 292 Gene3D - 87 164 IPR036638 GO:0046983
Car05g02663 292 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 98 165 IPR036638 GO:0046983
Car05g02663 292 CDD bHLH_AtFAMA_like 101 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02663 Car-Chr5 71609523 71611243 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02663 1 260 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 48.829 2.74e-74 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Car05g02663 HLH 1.8e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02663 - - gmx:100805420 361.303