Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02655 ATGCCTATCAGAAGCATTACAAGGGAATTTATTGGCAAGCCAATAAGATGCAAAGCTGCAATATGCAAAAAATCAGGTGAACCTCTTGTTATTGAGGAAGTTGAATTAGACCCACCAAAATCATGGGAGGTTCGGATCAAAATTTTATGCACTTCTCTCTGCCACTCTGATGTGACCTTTTGGAAAATGGATTCTTCAGCACCTGCTGCTAAATTTCCAATAATTTTGGGACACGAAGCTGTGGGAGTTGTGGAGAGTGTGGGGGAGCATGTTGAAGAAGTGAAAGAGGGGGATTTAGTGGTGCCAGTGTTCCTAGCAAACTGTGGGGAATGCAGAGATTGCGAGAGCAGAAAAAGCAACATGTGCTCCAAGTTTGGAAGTGGAGCCATCCGTGACATGCCCAGAGATGGAACCAGCAGGTTTAGGGACATGAATGGAAAAGTGGTGCACCATTTATTGGGTGTTAGTAGCTTTTCTCAGTATACCGTAGTTGATGTAACTCATGTGGTTAAAATTCACCATCATTTTCCTCTTCATATGGCTTGTCTGCTCAGTTGTGGAGTTTCTACAGGGGTGGGGGCAGCATGGAAGGTGGCTGACGTAGAGAAAGGATCCACGGTGGCTATTTTTGGGCTTGGTGCTGTAGGCCTAGCTGTTGCTGTAGCAGCAAAGCAACGGGGAGCTTCAAAGATTATAGGCGTGGATCTAAATCAGGACAAATTTGAAATAGGAAAACAATTTGGAGTAACTGATTTTGTGAATCCCTCCAGTTGCAACGACAAGTCTGTGAGCGAGGTGATTAAGGATATGACAGATGGAGGAGCTGATTATTGCTTTGAGTGCATAGGATTGGCATCACTAATGGCAGAGGCTTTTAATAGCAGCAGAGAAGGTTGGGGAAAGACAGTGATAATAGGGGTGGAAATGCATGGGTCACCACTCAGTGTAAGTTCTTATAGCATCCTAAAAGGCAGAACTATCACCGGATCACTATTTGGAGGCTTCAAACCCAAAACTGATATTCCCTTACTCGCGAACAAGTACTTAGACAAAGAGCTTAACTTGGACGGGTTCGTATCACAAGAGGTAGATTTTAAAGACATTAATAAAGCTTTTGACTATCTTCTTCAAGGAAATACCATCCGTTGCATTATAAGAATGGATCATTAG 1170 0.4333 MPIRSITREFIGKPIRCKAAICKKSGEPLVIEEVELDPPKSWEVRIKILCTSLCHSDVTFWKMDSSAPAAKFPIILGHEAVGVVESVGEHVEEVKEGDLVVPVFLANCGECRDCESRKSNMCSKFGSGAIRDMPRDGTSRFRDMNGKVVHHLLGVSSFSQYTVVDVTHVVKIHHHFPLHMACLLSCGVSTGVGAAWKVADVEKGSTVAIFGLGAVGLAVAVAAKQRGASKIIGVDLNQDKFEIGKQFGVTDFVNPSSCNDKSVSEVIKDMTDGGADYCFECIGLASLMAEAFNSSREGWGKTVIIGVEMHGSPLSVSSYSILKGRTITGSLFGGFKPKTDIPLLANKYLDKELNLDGFVSQEVDFKDINKAFDYLLQGNTIRCIIRMDH 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02655 389 Pfam Zinc-binding dehydrogenase 214 337 IPR013149 -
Car05g02655 389 Pfam Alcohol dehydrogenase GroES-like domain 43 172 IPR013154 -
Car05g02655 389 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 177 350 IPR036291 -
Car05g02655 389 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 77 91 IPR002328 GO:0008270|GO:0016491
Car05g02655 389 SUPERFAMILY GroES-like 12 196 IPR011032 -
Car05g02655 389 SUPERFAMILY GroES-like 338 386 IPR011032 -
Car05g02655 389 PANTHER ALCOHOL DEHYDROGENASE 8 387 - -
Car05g02655 389 PANTHER ALCOHOL DEHYDROGENASE-LIKE 2 8 387 - -
Car05g02655 389 Gene3D - 191 330 - -
Car05g02655 389 Gene3D - 22 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02655 Car-Chr5 71535735 71539061 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02655 43 256 Monolignol Biosynthesis Gene Families AT4G37970 27.197 8.74e-13 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02655 K00121 - zju:107420743 560.451