Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02652 ATGGCGGTCGCTCATTCTCCTCGGGAAGAGAACGTGTACATGGCAAAGCTCGCCGAGCAAGCCGAGCGCTACGAAGAGATGGTGGAGTTCATGGAGAAGGTTTCCGCCAACGCTGATAACGAGGAACTCACGGTGGAGGAAAGGAACCTTCTCTCCGTAGCTTACAAGAACGTCATCGGAGCTCGACGCGCTTCGTGGCGTATCATTTCCTCTATTGAACAGAAAGAGGAGAGCCGCGGCAACGAGGACCACGTCGCTGTCATCCGTGACTACCGATCTAAGATCGAGTCAGAGCTCTCTAACATCTGTGACGGTATTCTCAAGCTCCTCGATTCTCGTCTGATTCCTTCCGCTTCCTCTGGCGATTCTAAGGTTTTCTACCTCAAGATGAAGGGAGATTACCACAGGTACCTTGCCGAGTTCAAGACCGGAGCCGAGCGTAAGGAGGCTGCAGAGAGCACTCTCTCCGCTTACAAATCTGCTCAGGATATTGCAAATGCGGAACTTCCTCCAACTCATCCCATTAGACTTGGACTTGCTCTCAACTTCTCTGTTTTTTACTATGAAATTCTTAACTCTCCTGATCGTGCCTGCAATCTTGCAAAACAGGCTTTCGATGAAGCGATTGCTGAATTGGATACCCTTGGAGAGGAATCTTACAAAGACAGCACTTTGATCATGCAACTCCTTCGCGATAACCTCACTCTCTGGACTTCTGACATGCAGGATGATGGTGCTGATGAAATTAAAGAAGCACCATCTAAACCGGATGAACCACAGCAGTAA 786 0.4936 MAVAHSPREENVYMAKLAEQAERYEEMVEFMEKVSANADNEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVAVIRDYRSKIESELSNICDGILKLLDSRLIPSASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLSAYKSAQDIANAELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAPSKPDEPQQ 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02652 261 Pfam 14-3-3 protein 14 238 IPR023410 -
Car05g02652 261 PIRSF 14-3-3 2 250 IPR000308 -
Car05g02652 261 PANTHER 14-3-3 PROTEIN 5 259 IPR000308 -
Car05g02652 261 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Car05g02652 261 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Car05g02652 261 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Car05g02652 261 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Car05g02652 261 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Car05g02652 261 PRINTS 14-3-3 protein zeta signature 211 240 IPR000308 -
Car05g02652 261 MobiDBLite consensus disorder prediction 241 261 - -
Car05g02652 261 ProSitePatterns 14-3-3 proteins signature 2. 220 239 IPR023409 -
Car05g02652 261 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Car05g02652 261 Gene3D - 1 251 IPR036815 -
Car05g02652 261 Coils Coil 14 41 - -
Car05g02652 261 SUPERFAMILY 14-3-3 protein 7 240 IPR036815 -
Car05g02652 261 SMART 1433_4 8 251 IPR023410 -
Car05g02652 261 MobiDBLite consensus disorder prediction 243 261 - -
Car05g02652 261 PANTHER 14-3-3 PROTEIN 6 5 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02652 Car-Chr5 71512237 71514301 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02652 6 261 14-3-3 family AT1G78300 90.272 2.33e-171 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02652 K06630 - gmx:100792014 489.189