Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02651 ATGGAGACTCAAGCTCACACTCAGAGAGATCGCAGAATAGATGCTCTTGGAGATCTTCAAGTTCTTCCCGACGAAATCCTATGCTCAATTTTGGAACGACTCACTCCACGAGATGCTGCTCGCGTCGCTTGCGTTAGCAGTGTGATGTACATACTATGCAACGAAGAACCACTATGGATGAGTCTATGTCTAAAAGGAGCATCTGGTTTTCTTCAATACAAAGGCTCTTGGAAGAAAACTGCCCTGCATAATGAGAATCTGCCAGACAAGTACAAAGAGTGCCACAGACAGCCTTTACATTTTGATGGATTCAACTCATTATTTTTGTATCGGAGATTATATCGGTGTCATACCACATTGGATGCATTTTATACACATGGTGGAAATGTGGAAAGAGTAAAAGACATCTCATTGAAGGGCTTCTATAACGAGTATGACATGAAGAAACCGGTCATGCTTAATGGACTGGCGGATACATGGCCTGCCAGGCATAAATGGACAACTGATCAGCTGTTGCAAAACTATGGAGATGTAGCATTTAAAATTTCTCAAAGGAGTTCCAGAAAGATCTCCATGAAGTTCAAGGATTATGTCTCATACATGAAAGTTCAGCATGATGAAGACCCATTGTATATTTTTGACGAGAAGTTTGGCGAACATGCACCTAACTTATTGAAGGATTACTGTGTGCCTCATCTTTTTCAAGAAGACTTCTTTGATATCTTAGATAAAGATAAACGACCATCCTATAGGTGGCTCATAATTGGACCAGAGAGATCTGGTGCCTCTTGGCATGTTGATCCAGCTCTTACAAGTGCATGGAATACTCTTCTTTCTGGCCGTAAAAGGTGGGCATTATATCCTCCTGGAAAAGTGCCTTTAGGTGTGACGGTACATGTTAATGAAGAAGATGGTGATGTCAATATTGAGACTCCAACATCACTTCAGTGGTGGCTAGATTTTTATCCTCTTCTTGCTGATGAAGACAAACCAATTGAATGTACACAACTACCTGGCGAAACCATTTATGTTCCGAGTGGATGGTGGCACTGTATTTTAAATTTGGAAACAACTATTGCAGTCACACAGAATTTTGTGAATTCTAATAACTTCGAATTTGTATGTTTGGACATGGCACCTGGTTATCGTCATAAAGGAGTTTATAGTTATGAAAGTGTCATACAGAACGTGTCATGTAATGGAGAAGACTTACATTACTCTGATTTGTCAAGGAAAGAGAAAAGAGCCAAAACTCTCAAAGATGTAGACGATCTATGTTTTGAAAGAGAAATAAGTGGTTTATCTAGAAGCTATAATTTATGGAAAGACGGATTTTCTTATGATATAAATTTCTTATCCATGTTCTTGGATAAGGATAGAGACCACTACAGTTCTGAGTGGAGCTCAGGCAACAGCATTGGTCAACGAGAACTAAGAGAATGGTTATCCAAGCTTTGGATTCAAAAACCCAAAATGAGAGATCTAATATGGAAGGGAGCATGTATTGCACTAAATGCTGGCAAGTGGTTAGAATGCCTGTCAAAAATTTGTGCCTTCCACAATTTGCCCCCTCCCACTGATGACGAAAGGCTTCCTGTTGGTACGGGTAGCAATCCTGTCTATCTAGTGGGGAACTATGTTGTTAAGATTTTTGTTGAAGGAGGACTTGAAGCATCGCTTTATGGTTTAGGCACAGAGCTAGAGTTTTATAGCCTGCTGCATGACGCCAACTCCCCTCTCAGGAAACATATTCCCAGTGTTATGGCCAGTGGAGTTGTTTATTTTGAAGACGGATCCTATAGCAATTTAAGTTGGGATGGAAAAGGGGTTCCCAGTGTCATTTTGAAGAGCAATATCATCTCAGAGAAATGCGATGTCGATGGTTTCCCATTTGGGGTGTGGGGCAAGAAACTGTTAGAGTATAGGAATGCTGGGATTCCGGTGGAGGGATCAGTTAGTTTAGTGGATCACCCAAGCATATGGCCGTATATGATAATTAAGCGATGTGAAGGGAATATGTTTGCAGAGTTAAGAGACAGATTATCATGGGAAGATACAACAAACTTGGCCTCCTTCTTGGGGGAGCAAGTGCGCCACCTTCATCTTTTGCCACATCCACCTCTAAATATTTCATTTATATCTGATATGGAACGTGAATTAAGCTGGTCTGAGGCGAATGATTGTATTTCAAATGTTAATTGTAAATCAAACCATGCAGTGGAATGGGGAATCTTCACCAGAATCTTAACAAAGAAGAGGAAGGATGTTTCAAGCCGTTTGACCAAGTGGGGAGATCCTATTCCTAGCAAGCTTATTGAGAAAATTGATGAATATATCCCATCTGATTTAGCTAAGCTGCTAAATATAAATGAGAATTTGTCAAGCGGTGCTTGTAAACCTTGCTCCTGGATACACACCGACATTATGGACGATAATATTTACATGGAATCATCATCGGCTTGCTCTACCTCCAGTGGGTATACAGAAGATGGTGCCCAGGTGGACAATGGTTTATTGAGTGACCATGATGGAGTGAAATCCTGGAGTCCTAGTCACATCCTTGATTTCAGTGATCTTTCTATGGGCGATCCTATTTTTGACTTGATACCAATTTATTTAGACGTGTTTAGAGGCGATTCATATCTCCTTAAGCAATTTTTAGAAAGTTACAAACTTCCTTTTGCTTGCAACATATCGAAGTGCGAGTCAACAGAGGGTGGTCAAAAGTTTGGTCGACTTTCATATGTTGCTATGTGTTATTGTATTTTGCATGATGATAATGTCTTGGGAGCTATTTTTAGCATATGGGAAGAACTGAGATCATCAGAGTCATGGGAAGAAGTTGAGATGACAGTGTGGGGAGAGTTGAACAATTACAAAGGCTTTCTTTGA 2892 0.4039 METQAHTQRDRRIDALGDLQVLPDEILCSILERLTPRDAARVACVSSVMYILCNEEPLWMSLCLKGASGFLQYKGSWKKTALHNENLPDKYKECHRQPLHFDGFNSLFLYRRLYRCHTTLDAFYTHGGNVERVKDISLKGFYNEYDMKKPVMLNGLADTWPARHKWTTDQLLQNYGDVAFKISQRSSRKISMKFKDYVSYMKVQHDEDPLYIFDEKFGEHAPNLLKDYCVPHLFQEDFFDILDKDKRPSYRWLIIGPERSGASWHVDPALTSAWNTLLSGRKRWALYPPGKVPLGVTVHVNEEDGDVNIETPTSLQWWLDFYPLLADEDKPIECTQLPGETIYVPSGWWHCILNLETTIAVTQNFVNSNNFEFVCLDMAPGYRHKGVYSYESVIQNVSCNGEDLHYSDLSRKEKRAKTLKDVDDLCFEREISGLSRSYNLWKDGFSYDINFLSMFLDKDRDHYSSEWSSGNSIGQRELREWLSKLWIQKPKMRDLIWKGACIALNAGKWLECLSKICAFHNLPPPTDDERLPVGTGSNPVYLVGNYVVKIFVEGGLEASLYGLGTELEFYSLLHDANSPLRKHIPSVMASGVVYFEDGSYSNLSWDGKGVPSVILKSNIISEKCDVDGFPFGVWGKKLLEYRNAGIPVEGSVSLVDHPSIWPYMIIKRCEGNMFAELRDRLSWEDTTNLASFLGEQVRHLHLLPHPPLNISFISDMERELSWSEANDCISNVNCKSNHAVEWGIFTRILTKKRKDVSSRLTKWGDPIPSKLIEKIDEYIPSDLAKLLNINENLSSGACKPCSWIHTDIMDDNIYMESSSACSTSSGYTEDGAQVDNGLLSDHDGVKSWSPSHILDFSDLSMGDPIFDLIPIYLDVFRGDSYLLKQFLESYKLPFACNISKCESTEGGQKFGRLSYVAMCYCILHDDNVLGAIFSIWEELRSSESWEEVEMTVWGELNNYKGFL 963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02651 963 Gene3D - 4 93 - -
Car05g02651 963 ProSiteProfiles F-box domain profile. 16 62 IPR001810 GO:0005515
Car05g02651 963 Pfam F-box-like 21 65 IPR001810 GO:0005515
Car05g02651 963 PANTHER ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD 5 896 - -
Car05g02651 963 SMART fbox_2 22 62 IPR001810 GO:0005515
Car05g02651 963 SUPERFAMILY Protein kinase-like (PK-like) 516 890 IPR011009 -
Car05g02651 963 SMART cupin_9 214 377 IPR003347 -
Car05g02651 963 PANTHER JMJC DOMAIN-CONTAINING PROTEIN 8 5 896 - -
Car05g02651 963 Gene3D Cupin 114 367 - -
Car05g02651 963 Pfam Cupin-like domain 148 369 IPR041667 -
Car05g02651 963 SUPERFAMILY Clavaminate synthase-like 123 387 - -
Car05g02651 963 SUPERFAMILY F-box domain 10 67 IPR036047 GO:0005515
Car05g02651 963 ProSiteProfiles JmjC domain profile. 219 382 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02651 Car-Chr5 71494996 71510539 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02651 8 959 Glycosyltransferase AT1G78280 60.389 0.0 1185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Car05g02651 Cupin_8 1.2e-21 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02651 - - mtr:MTR_3g099370 1787.31