Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02641 ATGGAATGTAACAAAGATAATGCCTTAAGGGCTAAAGAGATGGCAGAGAAGAGGTTTTTACAGAAGGACCTTGGTGGTGCGAGACTACTTGCAATGAAGGCTCAAGCTTTGTATCCCAACATTGGTGGTCTACCTCAATTTCTTGCAACTCTTGATGTGTATATTGCTGCCGAAAAAAGAATTAGAGGAGAAATAGATTGGTACAAGATCCTTGGTGCACAACCTTTGGCGGATGATGAAGCAATTCGAAAATGTTATAGAAAGATGGCTCTTGCTCTGCACCCAGATAAAAATAAGTCAGTGGGTGCAGATGGGGCATTTAATCTTATCTCTCAAGCTTGGACAGTATTGTCTGATAAAGCCAAGAGAACCGAATTTGATAGAAAGTACATGTGGTGGGATTCGTTAAAAGAAATTTCTGATGAGAAACCTACTCCTGCACCGCCTTTGAAACTGCAGACATTTTGGACTCTGTGCACTTCCTGCAGGACAAAGTTTGAGTACTTAGCTATGTACAGGAACTGCAATCTTGCCTGCACCAGCTGCAACAAGTCATTTTTTGCTTCTGAGATACCAACCCCGTCTGTATATGCAAATGCTTCATCCACTTCAAGACCTTCTCATATGAAGCAACATAACTTCAACTCAACCGGATTGGGAAGAAACTGTCATGTTTCGAGTAGGACACCGATGTCTGCTGTCAACTTACCTTTTGGGTCACGTCCTTTTTCCATGCCTGGTGGCATTTCCAATGTACTATCATCGGTTTCTAGTGCTTCTGGAGCTCCCGGTGTTTTTAGGATGCCGTCTGAGAGTTTGAAGAGAAAGCGTGGAGATTCGACACCTTTCATGTGGGAAGAGGTGCGCTCGGGGAAAACTCATGCTCCTGAGACAACTGTTGCTGGTTCAGTTTTTCAGTCTTCTTGTTTTATGTCAAATCCTGTTCTAAAATCTGATGGGGCAAGGAAGAAAAGGTGCACAGGTGAACATAAAGCTGATGGTGATAGAAGAGACATGGAAAATGAAATGGAATCAAAAAAGGGTATAAACTTGACCAATGAGTTTGGGTCTCGGAAAAATAGTTTTGATGCCGGAAAGGTTAGTGCTGCTGGAAACTCCAGAAGAAATGGTATTAGGGACATATCTCAGCAGCAAATGAAAAACATCTTGGCGGAAAAGGCTCGAACAGAGATTCGCAAGAAGCTTGATGAGTGGAAGGAGAATCAAAGAAAGCTTGATGAGTGGAAGGAGATTCGTAGAAAGCTTGATGAACGGTGTGCTTCTTCTGTATCAAAGAATACTGATGCAGAAGTTAGAGCGAAGGACAAAGAAAAGACTATTAGTGGTGTGAAGCCTGCTGCAAAAAAAATTGTTGATTCCAAGACCAACGACAAATGTACCTCTGCTGATTCAGAGGTGCCTGGTTCTCTCTTAATGAGTGTTCCAGACCCAGATTTCCATGATTTTGATGGAGATCGAATTGAGGACACTTTTGATGAGAACCAGGTGTGGGCTGCATATGATGATGAAGATGGCATGCCGCGCTACTATGCCTTTATCCATTCTGTGATCTCAAAGAATCCTTTCCAAATGAAGATAAGTTGGCTGAGCTCTAAAACCAATGATGAATTGGCTCCGATAAAGTGGGTCAGTTCTGGTTTTCCAAAGACCACTGGAGATCTCCGACTAGGTAAACGTGCAATCTATAGTAGTCTCAATTCTTTCTCTCACAGGGTCAACTGGACAAAAGGTTCAAGAGGACTTGTCCATATATACCCAAAGAAAGGTGATGTTTGGGCTCTATATCGGAACTGGTCCCTTGATTGGAATGAATTTACTAAAGACGATATCATACATCAATATGACATGGTGGAAGTGCTTGAAGACTACAGTGAAGAGCATGGTGTGAATGTTGCTCCACTTCTCAAGGTTGCAGGTTTCAAGACAGTATTCCGCCAGAATGCTGATCCGAGAAAAGTCAGGAACATTCCGAGGGCAGAGATGTTTCGTTTTTCACACCAGGTACCTTCATACTTGCTTACTGGACAAGAAGGTAACAATGCTCCTAAAGGTTTCTTGGAGCTGGATCCTGCTTCTACACCTATGGAACTTCTTCGGTTGATCACTGATGCGGAGATGCAAGAAATGGATATGGAAATGACGGTCAGAAATTCTTCAAAAGATGGATTGAGGAACAAGAAGCATTCAAGTAAGGAAGAAGATTCTGTGGAAGATGTTCCAAGAAAGGAGGTGGCTGAAGCACAGGCAGGGAAGGTGTGGCCGGAGAATTTGCTTGTATATAGACGGAAGCGTTTTAGGGGAAAGAGCGAGCGGTGA 2337 0.43 MECNKDNALRAKEMAEKRFLQKDLGGARLLAMKAQALYPNIGGLPQFLATLDVYIAAEKRIRGEIDWYKILGAQPLADDEAIRKCYRKMALALHPDKNKSVGADGAFNLISQAWTVLSDKAKRTEFDRKYMWWDSLKEISDEKPTPAPPLKLQTFWTLCTSCRTKFEYLAMYRNCNLACTSCNKSFFASEIPTPSVYANASSTSRPSHMKQHNFNSTGLGRNCHVSSRTPMSAVNLPFGSRPFSMPGGISNVLSSVSSASGAPGVFRMPSESLKRKRGDSTPFMWEEVRSGKTHAPETTVAGSVFQSSCFMSNPVLKSDGARKKRCTGEHKADGDRRDMENEMESKKGINLTNEFGSRKNSFDAGKVSAAGNSRRNGIRDISQQQMKNILAEKARTEIRKKLDEWKENQRKLDEWKEIRRKLDERCASSVSKNTDAEVRAKDKEKTISGVKPAAKKIVDSKTNDKCTSADSEVPGSLLMSVPDPDFHDFDGDRIEDTFDENQVWAAYDDEDGMPRYYAFIHSVISKNPFQMKISWLSSKTNDELAPIKWVSSGFPKTTGDLRLGKRAIYSSLNSFSHRVNWTKGSRGLVHIYPKKGDVWALYRNWSLDWNEFTKDDIIHQYDMVEVLEDYSEEHGVNVAPLLKVAGFKTVFRQNADPRKVRNIPRAEMFRFSHQVPSYLLTGQEGNNAPKGFLELDPASTPMELLRLITDAEMQEMDMEMTVRNSSKDGLRNKKHSSKEEDSVEDVPRKEVAEAQAGKVWPENLLVYRRKRFRGKSER 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02641 778 PANTHER HEAT SHOCK PROTEIN-LIKE 1 718 - -
Car05g02641 778 Pfam Domain of unknown function (DUF3444) 479 684 IPR024593 -
Car05g02641 778 MobiDBLite consensus disorder prediction 321 347 - -
Car05g02641 778 MobiDBLite consensus disorder prediction 321 373 - -
Car05g02641 778 SMART dnaj_3 65 122 IPR001623 -
Car05g02641 778 MobiDBLite consensus disorder prediction 721 754 - -
Car05g02641 778 CDD DnaJ 66 119 IPR001623 -
Car05g02641 778 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Car05g02641 778 Gene3D DnaJ domain 64 131 IPR036869 -
Car05g02641 778 MobiDBLite consensus disorder prediction 721 752 - -
Car05g02641 778 SUPERFAMILY Chaperone J-domain 62 125 IPR036869 -
Car05g02641 778 Coils Coil 388 408 - -
Car05g02641 778 PRINTS DnaJ domain signature 68 86 IPR001623 -
Car05g02641 778 PRINTS DnaJ domain signature 86 101 IPR001623 -
Car05g02641 778 PRINTS DnaJ domain signature 102 122 IPR001623 -
Car05g02641 778 Pfam DnaJ domain 66 127 IPR001623 -
Car05g02641 778 PANTHER BNAC03G44070D PROTEIN 1 718 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02641 Car-Chr5 71417116 71421105 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02641 4 192 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 36.041 1.43e-29 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02641 - - gmx:100797672 903.664