Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02621 ATGGAAAATGTGAAGTTTATTAAAAATGGAATAAGCAAATTGCCTCCTGGTTTTCGTTTTCAGCCAACCGACGAAGAGCTTGTCTTTCAATACTTAAAATGTAAAATCTTGTCCTATCAATTGCCTGCTTCAATCATTCCTGAGATCAATGTTTGCAACTACGATCCTTCGGATTTGCCAGGAAATTATGGTGAGCAAGATAGATATTACTTCAGCAGCAAGGAAACAAAGTATCGAAACGGAAATCGCATGAATCGAACAACGAAGTCTGGATATTGGAAAGCAACAGGATCAGAGAAGAAAGTTATAAGAATTTCTTCATCAATAAGTAATAATAATGTTGGTCTTGCAGGGATAAGAAAAAGTCTTGTGTTTTATAAAGGAAAATCTCCAAATGGATCTCGAAGTGATTGGATTATGCATGAATATCGCCTAGTCAATGTAGAAAGTAACTCATCCCACCAGAAGTATGTAAAGGAGATAGGGGATTGGGTTGTGTGTCGAATATTCATGAAGAAAAGAAGAAATGTAGACAAATACAGTGTTTCAATCATGAATCAGCCAAGATTCTTTGATTTTATGAGGGTACACAACGCTGCTCCGGGGCCTATGATTACATCCTCATCTTCTTCAACTTCCACTGAGGTTTCTTCATCTGATCAAACAAGTGGCTATATATGTTGA 684 0.3684 MENVKFIKNGISKLPPGFRFQPTDEELVFQYLKCKILSYQLPASIIPEINVCNYDPSDLPGNYGEQDRYYFSSKETKYRNGNRMNRTTKSGYWKATGSEKKVIRISSSISNNNVGLAGIRKSLVFYKGKSPNGSRSDWIMHEYRLVNVESNSSHQKYVKEIGDWVVCRIFMKKRRNVDKYSVSIMNQPRFFDFMRVHNAAPGPMITSSSSSTSTEVSSSDQTSGYIC 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02621 227 Pfam No apical meristem (NAM) protein 15 145 IPR003441 GO:0003677|GO:0006355
Car05g02621 227 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 219 - -
Car05g02621 227 MobiDBLite consensus disorder prediction 204 227 - -
Car05g02621 227 Gene3D NAC domain 23 177 IPR036093 GO:0003677|GO:0006355
Car05g02621 227 ProSiteProfiles NAC domain profile. 14 172 IPR003441 GO:0003677|GO:0006355
Car05g02621 227 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 219 - -
Car05g02621 227 SUPERFAMILY NAC domain 11 172 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02621 Car-Chr5 71253764 71254872 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02621 1 195 NAC Transcription Factor Family AT5G13180 52.703 5.08e-69 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Car05g02621 NAM 1.5e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02621 - - aprc:113868555 287.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02621 05 71253764 71254872 Car05g02621 05 71253764 71254872 ECH