Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02612 ATGAAGGAATCAACGGAAACAGACCCTATAACCCTTTGTATCAACACTACCCATTCACTCCTCGAAGACGAAATCCCCACCGTCCATCACTTAAAAAGCAAGTGGTCAATCTTCCGAGTCAAACTAACTCAACTCCAAACCCACCTCACAGATTTCTCCTCCGAGTATCTCAAATCCTCAACCTCAAACCCTCTCTCCATTCACCTCATTCATTCCATCTCACAAACCCTAAACGACGCCGTTTCACTCGCACAGCACTGTCAATCTCACTCCCCCGACTTACCCAACGGAAAACTCCAAACACAAAGCCACATCGACTCATTAACTGCCACTCTCCACCGCCACGTCACCGACTGCGATGTGCTCTTTCGTAGTGGCCTCCTCCTCGAAACTCCCGCTTTTTCTAAAAGAGAAGCAGTTCGATCTCAATCTAGAAACCTCATCGCACGGTTACAAATTGGATCACCCGATTCAAGAGCCTCCGCGATTGACTCACTACTTTCACTTCTCCAAGAAGACGATAAGAACGTCACCATAGCTGTGGCGCAGGGTGTAGTTCCGGTGCTCGTTCGTTTACTAGATTCCTCCTCCGATATGAAGGAGAAAACCGTCGCAGCCATTTCTAGAGTCTCCACGGTGGAAAGCGGTAAGAATAACCTATTAGCAGAGGGATTGTTGTTGCTTAATCACTTGCTTAGGGTTTTAGATTCTGGAAGTTGTTTAGCTATAGAGAAAGCTTGCATCGCGCTTCAGGCTTTGAGTTTCACAAGAGACAACGCAAGAGCTATTGGATCTAGAGGCGGAATCTCGTCTCTGTTAGGGATTTGTCAAGGTGGTACACCTGGTTCTCAAGCTTCTGCGGCGTCGGTTTTGAGGAATCTTGCGAAATTTGGTGAAATTAGAGAGAATTTCGCGGAGGAGAATGCGGTTGTTGTTTTATTAGGGTTAGCTTCTTCTGGAACGTTATTGGCGCAAGAAAACGCGATCGGTTGTTTGGCCAATTTGATTTCGGAGGATGAGAGTATGAGGATTTTGGCTGTTAAAGAAGGTGGAGTTGAGTGTTTGAAGAATTTCTGGGATTCGGCTCCAATGATTCAGAGTCTTGAAGTTGCGGTTGAAATGTTGAGGCATTTGGGTACAAATGGTGCAATTGGGGAGGTTCTTGTTGGAGAAGGGTTTGTTGGGAGAGTGATAGGAGTGTTGAATTGTGAAGTTTTAACAGTGAGGATCGCGGCGGCGAGAGCTATTTACGCTTTGGGATTGAACGGTGGTGGGAAGACGAGGAAGGAAATGGGGGAATGTGGTTGTGTTCCTTTTTTGATCAAGATGTTAGATGGGAAAGGTGTGGAGGAGAAAGAATCTGCTGCAATGGCGTTGTCGGTGTTATCTCTACACCCTTACAATAGGAGGATTTTTCGTAAGGATGAGAGGGGAATAGTGAGTGCAGTTCATCTATTGAACCCTTCTATGGTGAATTTGGATAAGAAATACCCTGTTTCGTTGCTGGTTTCGCTATTGCATTCTAAGACATGTAGGAAACAAATGGTGGCAGCTGGGGCTTGTGTATATACTCCGAAGCTTGTTGAATTGGATGTTCCTGGTTCTAAGAAACTGTTGGATGGACTTGGTCGTGGTAAGATTTGGGGAGTTTTTGCAAGACCCTAA 1665 0.4577 MKESTETDPITLCINTTHSLLEDEIPTVHHLKSKWSIFRVKLTQLQTHLTDFSSEYLKSSTSNPLSIHLIHSISQTLNDAVSLAQHCQSHSPDLPNGKLQTQSHIDSLTATLHRHVTDCDVLFRSGLLLETPAFSKREAVRSQSRNLIARLQIGSPDSRASAIDSLLSLLQEDDKNVTIAVAQGVVPVLVRLLDSSSDMKEKTVAAISRVSTVESGKNNLLAEGLLLLNHLLRVLDSGSCLAIEKACIALQALSFTRDNARAIGSRGGISSLLGICQGGTPGSQASAASVLRNLAKFGEIRENFAEENAVVVLLGLASSGTLLAQENAIGCLANLISEDESMRILAVKEGGVECLKNFWDSAPMIQSLEVAVEMLRHLGTNGAIGEVLVGEGFVGRVIGVLNCEVLTVRIAAARAIYALGLNGGGKTRKEMGECGCVPFLIKMLDGKGVEEKESAAMALSVLSLHPYNRRIFRKDERGIVSAVHLLNPSMVNLDKKYPVSLLVSLLHSKTCRKQMVAAGACVYTPKLVELDVPGSKKLLDGLGRGKIWGVFARP 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02612 554 SUPERFAMILY ARM repeat 146 492 IPR016024 -
Car05g02612 554 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 184 225 IPR000225 GO:0005515
Car05g02612 554 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 7 552 - -
Car05g02612 554 SMART arm_5 256 296 IPR000225 GO:0005515
Car05g02612 554 SMART arm_5 424 464 IPR000225 GO:0005515
Car05g02612 554 SMART arm_5 297 337 IPR000225 GO:0005515
Car05g02612 554 SMART arm_5 173 212 IPR000225 GO:0005515
Car05g02612 554 PANTHER ARMADILLO-TYPE FOLD PROTEIN-RELATED 7 552 - -
Car05g02612 554 Gene3D - 363 532 IPR011989 -
Car05g02612 554 Gene3D - 134 362 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02612 Car-Chr5 71203405 71205645 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02612 225 465 U-box Gene Family AT2G23140 24.481 1.04e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02612 - - gmx:100807228 766.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02612 05 71203405 71205645 Car05g02612 05 71203405 71205645 ECH