Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02607 ATGAAGTTCAATAGTACTATTGCAATGGCTATGTTAATTTTTCTTCATCTTAGTTTTCTTTCCTTGAAGGTGTTTTGTTTCTCTTCTCAACATCATTCTCATGCAGATAGAATTGTTGGTCTTCCTGGACAACCACACATAACCTTTCAACAATTCTCAGGATATGTATCAGTTGATGACAAGAAAAACAAGTCTCTTTTTTACTATTTTGTTGAATCAGAAATTGATCCACCTTCAAAACCTCTTGTTCTTTGGCTCAATGGAGGACCTGGTTGTTCTTCACTAGGAGTAGGTGCATTCTCAGAAAATGGACCCTTTAGACCAAATGGTGAATTTCTCATAAAAAATGAACATAGTTGGAATAAAGAGGCAAACATGTTGTATTTAGAGACACCAATTGGAGTTGGATTCTCTTATGCTAAAGGTAGTTCCTCTTATACAACAACAGTAAATGATGAGGAAACAGCAAGGGACAATCTTGTATTCTTGCAACGTTGGTTCAATAAGTTTCCACAATATAGAAACAGAGATTTGTTTCTAACAGGAGAAAGTTATGCAGGTCATTATGTTCCTCAACTTGCAAAACTCATGATTGAAATGAACAAGAGAAACAAGATATTCAATCTTAAAGGCATAGCTTTGGGAAATCCAGTTTTAGAATATGCCACTGATTTCAATTCAAGGGCTGAATTCTTTTGGTCTCATGGACTAATTTCAGATTCAACATACAACATGTTTACTACTGTGTGTAATTACTCTCGCTATGTGAGTGAGTACAATAGAGACTCAGTTTCACCTCTTTGTTCAAAGGTTATGGGATTGGTGAGCAAAGAAACTAGTAAATTTGTTGACAAATATGATGTCACACTTGATGTTTGCATTTCATCTGTGTTATCACAATCCAAGGTTATTAATCCTCAACCACAACAAGCGAATGAGAGGATCGATGTATGTGTGGATGACAAGGTTACAAACTACTTAAACCGGAGAGATGTGCAAGAGGCACTTCATGCTAAGCTTGTCGGAGTTCGCAAGTGGGATGTTTGTAGCAACATTTTGGACTATGATGTGCTTAACTTGGAAGTGCCAACACTTCCTATTGTTGGATCATTGATAAAATCTGGAGTGAGAGTTCTAATTTACAGTGGAGATCAAGATTCAGTAATTCCACTAACTGGAAGTAGAACCTTAGTTCAAAAGTTGGCTAGACAATTAGGACTTAATACGACAGTCTCTTACAGAGTATGGTTTGAAAGCCAACAGGTTGGTGGATGGACTCAAGTTTATGGGAATATGCTCTCATTTGCAACAGTCAGAGGTGCTGCACATGAAGTTCCTTTCTCACAGCCTGAAAGATCACTTGTGCTATTCAAATCATTCTTGGAAGGAAGGCCTTTACCTGAAGTTTTCTGA 1413 0.3715 MKFNSTIAMAMLIFLHLSFLSLKVFCFSSQHHSHADRIVGLPGQPHITFQQFSGYVSVDDKKNKSLFYYFVESEIDPPSKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGEFLIKNEHSWNKEANMLYLETPIGVGFSYAKGSSSYTTTVNDEETARDNLVFLQRWFNKFPQYRNRDLFLTGESYAGHYVPQLAKLMIEMNKRNKIFNLKGIALGNPVLEYATDFNSRAEFFWSHGLISDSTYNMFTTVCNYSRYVSEYNRDSVSPLCSKVMGLVSKETSKFVDKYDVTLDVCISSVLSQSKVINPQPQQANERIDVCVDDKVTNYLNRRDVQEALHAKLVGVRKWDVCSNILDYDVLNLEVPTLPIVGSLIKSGVRVLIYSGDQDSVIPLTGSRTLVQKLARQLGLNTTVSYRVWFESQQVGGWTQVYGNMLSFATVRGAAHEVPFSQPERSLVLFKSFLEGRPLPEVF 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02607 470 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 31 468 IPR001563 GO:0004185|GO:0006508
Car05g02607 470 PRINTS Carboxypeptidase C serine protease (S10) family signature 116 128 IPR001563 GO:0004185|GO:0006508
Car05g02607 470 PRINTS Carboxypeptidase C serine protease (S10) family signature 129 139 IPR001563 GO:0004185|GO:0006508
Car05g02607 470 PRINTS Carboxypeptidase C serine protease (S10) family signature 166 191 IPR001563 GO:0004185|GO:0006508
Car05g02607 470 PRINTS Carboxypeptidase C serine protease (S10) family signature 433 446 IPR001563 GO:0004185|GO:0006508
Car05g02607 470 Pfam Serine carboxypeptidase 45 463 IPR001563 GO:0004185|GO:0006508
Car05g02607 470 SUPERFAMILY alpha/beta-Hydrolases 40 467 IPR029058 -
Car05g02607 470 ProSitePatterns Serine carboxypeptidases, serine active site. 180 187 IPR018202 GO:0004185
Car05g02607 470 Gene3D alpha/beta hydrolase 31 466 IPR029058 -
Car05g02607 470 PANTHER CARBOXYPEPTIDASE 31 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02607 Car-Chr5 71120784 71124670 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02607 326 466 Calmodulin-binding Proteins AT2G22960 28.369 3.30e-17 77.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02607 05 71120784 71124670 Car05g02607 05 71120784 71124670 ECH