Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02605 ATGGCAAAAGAGCAAGAAAAGCAACACCCTTTTACTTCACCATCATTCACTAACTATTTACAAAGCCAGAACCAAAACCAAAACAACGAGTATCAAGGATTATCGCCTCTCAATGTTACTTCTCGGGTTTTGTATATGTTGGGAGATATCACCGCAGGACCTGCTTTTATGTTCACTCAATGGCTTCAATCTGTTCGTAAACGCACCTCCAGTTATCGCTCCTCTGGATTCCCTCGCTCTTCTTCCACCATGCCTTCTTGTGATGGAGATTTTGTAGAGGATGCAGAAATTGATAAGCTTCCTGAGCAAATCGAAATTAGTTTGTGGGATAGGCTTGGTAAAGCTGAAATGTTGGACATTGAATCAACCTCCTTTTCTTGGAATACGCTCTCTTCACTTCACCACACAGAACACACGAGCAACGAACAGTCTGGGGATGAAATGAATAGAGCTTTTGAGGTGACAGTAAATTCTGGAGGGGTCGTCTTCTTTGCCTTTTTCAATGTCCTTGGGACTAACGATGGTTCTCCAAAAGAAGCAGCAGCTGTCTTAAAGATATCTTCATCAAGAATGGCAACACAGTCTGAACGCCTTGGATATGAATTCGCCAAGTGGTTGGGAGTCCAAACTCCACAGGCTAGAGTCATTCACAATACCAATTTAGAATGGCTCCAAATAAAGAATGCTGCAGAAAAAGCAAAGGATGTAGCAAGTTGTGAGAATGATATAATTGGCGTAACGACATGTTCTGAACTTTTGGAAGCACTCGAGCTTAGTCGATGTCTCTTGTTTATGAGTTATGTGCATGGTTCACCTTTGCTTGAATGCTCTAGCGCATTTGAATCACAGGATTCGGCCGAAAGAATATCAGCAGGCCTTGGCAGGGTCATGGTGCTAGATCTTATTATCAGAAATGAAGATAGGCTTCCGTGCCATCAACTTAGATGGCGTGGGAACCCTGCCAATTTGTTATTGGCTGAAAAGACAATCTCTTCAAATTTAGATACAATAGGAGAAGCCTTTGATCTTTTAATGAACCGACATGGACCTGGAAAGACTAGGACTCTTCAAAAAGAAAGAAGGTCAACTTCAGTAAATAGCATATTGAGCTCTCATAATCATGGGATGGTATCACAAGGATCTCATCTTTCACAGATAAGAGAATCATCCGATGACATGAGCCTTAAAAGTCAAACATCTGGAGAATCAATGTTTATTGGCTCCAACATTGTGGCTATTGATTCTGTTGTGCCTCGTCGACCTCCTGTTGGAAAACGTGCAGATGATCAGGACAATTATCCTAAGTTTGTTGAGTTACTACTAAATAGCTCTGATTTTTCCTCTAACTTGTTATATGATATAACTGGAGGGAAATTAGGAAGTCCTCTTTTAGAAGACATAAATATAACAGTTGATGTACAAGGAATCGATATAACATTAATAGTTCATGAGTTCCGCTGTGGTTTCCGTGCTGCCCTCAGGGATATGCAAGGATTTCATATATTCCTGCTTACACTTCACCAAAAACTTGATAACTTGTTACGATTGTTTAATAATACTATAAGCAAAATATCATTGGGGGAGCCCGAAAAAGAAGATTCAGTAATTTCTAACTCACCTTCACCTACTACTGGTAGTGGTCCCTCTCCAACAAATAAGGAGAGGCTTTCCATTGATACCCATCGAGATTTTAGCGATTCAGATTCACAGAGATCTGTTCCAAGGGCATCACCATCTTCAGGCAATAGAGATTTTTGTGACTCTGCTTCTCCTATTTCAAGAGAAGGTTGGCATGGTAAATCCTCTAAAGGAAGCGTGGAGCCACTTCATGGTTCCCGCTTTACAGCTAAGCTTCGCGATTTTCATAAATTTGCCAAGGTTGATGCAGAAACTTATAAAGAATTGGAGCATTGGAATGAAATGCTTAAAAATGATGCTATCAAGTTATGCCAGGAGAACAATTTCAATTCTGGATTTTTTGAGGGTAGTGACAGCAACACAGTTGTTGATGCATATGAATTGAAGGTCAGACTTGAGCATATCCTTGAGAGGATTGCATTGATATCTGAGGCTGCAAATACAGAGAGACCATCCGCCATTACAAATAGCCTGTACATCGGTGGAGCACTATCTGCAAGATCTGTGTACACAATGCAACACTTGGGAATCACTCATATTTTGTGTTTATGTACTAATGAAATTGGACAATCAGATTCTCAATTTCCTGATCTATTCAATTACAAAAATTTCTCTGTGTGCGACAATGAGAATGCTAACATCAGCAGCATATTTGACGAAGCTTGTGATTTTATAGAAGATGTTGAGCGAACAGGCCAGAGTGTTTTAGTTCATTGCTTCGAAGGGAAAAGCAGAAGTGTCACTGTAGTCCTTGCTTACTTGATGCTCAGAAAGAAGTTCACATTAATAGAAGCATGGAATGCTATGAAAAAAGTTCACCGTCGAGCGCAGCCGAATGATGGTTTTGCTAAGATCTTACAAGAACTTGATCAAAAACTGTATGGGAAGGTTTCAATGGAGTGGCAGCGGCGGAAACCAAGTATGAAAGTTTGCCAAATATGTGGCAAGAATGCCGGATTGAGCAGCAGCTCCCTTAAGCTACATCTACAGAGATCACATAAAAGGCTATCATCAGGGAGTGTAGATAGTGCCATGACAATGGAAATCCAAAAGGCATTAACCACTTTGAATATTAGCCGTGGTGGGAGTGTTAGCCCCATACAAAGGCAATTTCATTCAATGAGAGATTAA 2769 0.4052 MAKEQEKQHPFTSPSFTNYLQSQNQNQNNEYQGLSPLNVTSRVLYMLGDITAGPAFMFTQWLQSVRKRTSSYRSSGFPRSSSTMPSCDGDFVEDAEIDKLPEQIEISLWDRLGKAEMLDIESTSFSWNTLSSLHHTEHTSNEQSGDEMNRAFEVTVNSGGVVFFAFFNVLGTNDGSPKEAAAVLKISSSRMATQSERLGYEFAKWLGVQTPQARVIHNTNLEWLQIKNAAEKAKDVASCENDIIGVTTCSELLEALELSRCLLFMSYVHGSPLLECSSAFESQDSAERISAGLGRVMVLDLIIRNEDRLPCHQLRWRGNPANLLLAEKTISSNLDTIGEAFDLLMNRHGPGKTRTLQKERRSTSVNSILSSHNHGMVSQGSHLSQIRESSDDMSLKSQTSGESMFIGSNIVAIDSVVPRRPPVGKRADDQDNYPKFVELLLNSSDFSSNLLYDITGGKLGSPLLEDINITVDVQGIDITLIVHEFRCGFRAALRDMQGFHIFLLTLHQKLDNLLRLFNNTISKISLGEPEKEDSVISNSPSPTTGSGPSPTNKERLSIDTHRDFSDSDSQRSVPRASPSSGNRDFCDSASPISREGWHGKSSKGSVEPLHGSRFTAKLRDFHKFAKVDAETYKELEHWNEMLKNDAIKLCQENNFNSGFFEGSDSNTVVDAYELKVRLEHILERIALISEAANTERPSAITNSLYIGGALSARSVYTMQHLGITHILCLCTNEIGQSDSQFPDLFNYKNFSVCDNENANISSIFDEACDFIEDVERTGQSVLVHCFEGKSRSVTVVLAYLMLRKKFTLIEAWNAMKKVHRRAQPNDGFAKILQELDQKLYGKVSMEWQRRKPSMKVCQICGKNAGLSSSSLKLHLQRSHKRLSSGSVDSAMTMEIQKALTTLNISRGGSVSPIQRQFHSMRD 922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02605 922 MobiDBLite consensus disorder prediction 528 609 - -
Car05g02605 922 CDD DSP 697 834 - -
Car05g02605 922 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 696 841 IPR029021 -
Car05g02605 922 SMART dsp_5 696 838 IPR020422 GO:0006470|GO:0008138
Car05g02605 922 MobiDBLite consensus disorder prediction 532 554 - -
Car05g02605 922 Gene3D - 270 416 IPR036940 GO:0016301
Car05g02605 922 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 761 817 IPR000387 GO:0016311|GO:0016791
Car05g02605 922 MobiDBLite consensus disorder prediction 1 20 - -
Car05g02605 922 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 32 922 IPR035010 GO:0004721|GO:0009737|GO:0043622
Car05g02605 922 PANTHER DUAL SPECIFICITY PHOSPHATASE FAMILY PROTEIN 32 922 - -
Car05g02605 922 MobiDBLite consensus disorder prediction 570 587 - -
Car05g02605 922 Gene3D Protein tyrosine phosphatase superfamily 679 851 IPR029021 -
Car05g02605 922 SUPERFAMILY Protein kinase-like (PK-like) 60 430 IPR011009 -
Car05g02605 922 ProSiteProfiles Dual specificity protein phosphatase domain profile. 696 841 IPR020422 GO:0006470|GO:0008138
Car05g02605 922 Pfam Dual specificity phosphatase, catalytic domain 704 837 IPR000340 GO:0008138|GO:0016311
Car05g02605 922 Pfam Actin-fragmin kinase, catalytic 105 388 IPR015275 -
Car05g02605 922 MobiDBLite consensus disorder prediction 555 569 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02605 Car-Chr5 71069635 71080655 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02605 28 907 Protein tyrosine phosphatase (PTP) family AT5G23720 61.229 0.0 1047
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02605 K14165 - gmx:102661225 1283.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02605 05 71069635 71080655 Car05g02605 05 71069635 71080655 ECH