Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02603 ATGTCGGTTACTAAATGGCAAAAGAGCAAGAAAAGCAACAACCCTTCTATTTCAGCAGCATTCACTAACTATTTACAAGATCAAAACCAAAACAACGAGTATCAAGGATTATCGCTGCTCACTGTTACTTCTCGGGTTTTGTATATGTTGGGAGATATCACCGCAGGACCTGCTTTTATGTTCACTCAATGGCTTCAATCTGTTCGTAAACGCACTTCCAATTATCGCTCCTCTGGATTCCCTCGCTCTTCTTCCACCATGCCTTCTTGTGATGGAGATTTTGCAGATGATACACCAATTGATGAGTTTCTTGAGCAAACACATATTAGTTTGTGGGATAGACTTGGTAAAGCTGAAATGTTGGACATTGAATCAACCTCCTTTTCTTGGGATATGCTCTCTTCACTTCACCATACCGAACACACCAGTGAACCTTCTGAAGATGAAATGAACAGAGCTTTTGAAGTGACAGTAAATTCTGGAGGGGTTGTCTTCTTTGCCTTTTTCAATGTCCTTGGGACTAATGATGCTTCTTCAAAAGAAGCCGCCGCTGTCTTAAAGATATCTTCATCAAGAATGGCAACACAGTCTGAACGCCTCGGATATGAAGTCGCCAAGGAGTTTGGAGTCCAAACTCCACAGGCTAGAGTCATTCACAATACCAATTTAGAATGGCTCCAAATAAAGAATGCTGCAGAAAAAGCAAAGGATGTAGCAAGTAGTGAGAATGATATAATTGGTGAAACGACATGTTCTGAACTTTTGGAAGCACTCGAGCTTAGTCGATGTCTCTTGTTTATGAGTTATGTGCATGGTTCACCTTTGCTTGAAAGCTCTAGTGCATTTGAATCACAGGATTCTGCCGAAAGAATATCAGCAGACCTTGGCAGGGTAGTGATGCTAGATCTTGTAATAAGAAATGAAGATAGGCTTTCGTGCCATCAACTTAGATGGCGTGGGAACCCTGCCAATTTGTTATTGGCTGAAAAGGCAATCTCTTCAAATTTAGATACAATAGGAGAAGCCTTTGATCTTATAACGAACCGACATGGACCTGGGATGACTAGGATTCTTCAAAAAGAAAGAAGGTCAACTTCAGTAGATAGCATATTGAGCTCTCATACTCATGGTATGGTATCACAAGGCTCTCATCTTTCACAGATAAGAGAATCATCCGATGACGCGAACCTTAAAAGTCAAACATCTGGAGAATCAATGTTTATTGGCTCCAACATTGTGGCTATTGACTCTGTTGTTCCTCGTCGACCCCCTGCTGGAAAACGTGCAGATGATCAGGCTAATTATCCTAAGTTGGTTGAGTTACTACTAAATAGCTCTGATTTTTCCTCTAACTTGTTATATGATATAACCGGAGGAAAATTAGGAAGTCCTCCCTTAGAAGACTTAAATATAACAGTTGATGTACGAGGAAGCGATGAAACATTAATAGTTCATGAGTTCCGCAGTGGTTTTCGTGCTGCTCTCAGGGATCTGCAAAGATTTCATAAATTCCTGCTTACACTTCATCAAAAACTTGATAACTTGTTACGATCGTTTAATAATACTATAAGCAAAATATCATTGGGGGAGTCCGAAAAAGAAGATTCAGTAATTTCTAACTCACCTTCACATAATACTGGTAGTTGTCCCTCTCCAACAAGTAAGGAGAGGTTTTTCATTGATAGCCATCGAGATTTTGGCGATTCAGATTCACAGAGATCTGCTCTAAGGGCATCACCATCTTCAAGCAATAGAGATTTTTGTGACTCTGCTTCTCCTATGTCAAGAGAAGGTTGGCATGGTAAATCCTCTAAAGGATGCGTGGAGCCACTTCATGATTGTCGCTTTACTGCTAAGCTTCGCGATTTTCATAAATTTGCCAAGGTTGATGCAGAATCTTATAAAGAATTGGAGCATTGGAATGAAATGCTTAAAAATGATGCTATCAAGTTATGCCAGGAGAACAATTTCAATTCAGGATTTTTTGAGGGTAGTGACAGCAACACACTTGTTGATGCATATGAATTGAAGGTCAGACTTGAGCATATCCTTGAGAGGACTGCATTGATAGCTGAGGCTGCAAATACAGAGAGACCATCCGCCATTACAAATAGTCTGTACATCGGTGGAGCACTATCTGCAAGATCTGTATACACAATGCAACACTTGGGAATCACTCATATTTTGTGTTTATGTACTAATGAAATTGGACAATCAGATTCTCAATTTCCCGATCTATTCATTTACAAAAATTTCTCTGTGTGCGACAATGAGGACGCTGACATCAGCAGCATATTTGACGAAGCTTGTGATTTTATAGAAGATGTTGAGCGAACAGGCCAGAGTGTTTTAGTTCATTGCTTCGAAGGGAAAAGTAGAAGTGTCACTGTAGTCCTTGCTTACTTGATGCTCAGAAAGAAGTTCACATTAATAGAAGCATGGAATGCTATGAAAAAAGTTCACCGTCGAGCGCAGCCGAATGATGGTTTTGCTAAGATCTTACAAGAACTTGATCAAAAACTGTATGGGAAGGTTTCAATGGAGTGGCAGCGGAGGAAACCAACTATGAAAGTTTGCCCAATATGTGGCAAGAATGCCGGATTGAGCAGCAGTTTCCTTAAGCTACATCTACAAGATCACAAAGGCTATCATCAGGGAGTGTAG 2664 0.4032 MSVTKWQKSKKSNNPSISAAFTNYLQDQNQNNEYQGLSLLTVTSRVLYMLGDITAGPAFMFTQWLQSVRKRTSNYRSSGFPRSSSTMPSCDGDFADDTPIDEFLEQTHISLWDRLGKAEMLDIESTSFSWDMLSSLHHTEHTSEPSEDEMNRAFEVTVNSGGVVFFAFFNVLGTNDASSKEAAAVLKISSSRMATQSERLGYEVAKEFGVQTPQARVIHNTNLEWLQIKNAAEKAKDVASSENDIIGETTCSELLEALELSRCLLFMSYVHGSPLLESSSAFESQDSAERISADLGRVVMLDLVIRNEDRLSCHQLRWRGNPANLLLAEKAISSNLDTIGEAFDLITNRHGPGMTRILQKERRSTSVDSILSSHTHGMVSQGSHLSQIRESSDDANLKSQTSGESMFIGSNIVAIDSVVPRRPPAGKRADDQANYPKLVELLLNSSDFSSNLLYDITGGKLGSPPLEDLNITVDVRGSDETLIVHEFRSGFRAALRDLQRFHKFLLTLHQKLDNLLRSFNNTISKISLGESEKEDSVISNSPSHNTGSCPSPTSKERFFIDSHRDFGDSDSQRSALRASPSSSNRDFCDSASPMSREGWHGKSSKGCVEPLHDCRFTAKLRDFHKFAKVDAESYKELEHWNEMLKNDAIKLCQENNFNSGFFEGSDSNTLVDAYELKVRLEHILERTALIAEAANTERPSAITNSLYIGGALSARSVYTMQHLGITHILCLCTNEIGQSDSQFPDLFIYKNFSVCDNEDADISSIFDEACDFIEDVERTGQSVLVHCFEGKSRSVTVVLAYLMLRKKFTLIEAWNAMKKVHRRAQPNDGFAKILQELDQKLYGKVSMEWQRRKPTMKVCPICGKNAGLSSSFLKLHLQDHKGYHQGV 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02603 887 ProSiteProfiles Dual specificity protein phosphatase domain profile. 698 843 IPR020422 GO:0006470|GO:0008138
Car05g02603 887 SMART dsp_5 698 840 IPR020422 GO:0006470|GO:0008138
Car05g02603 887 MobiDBLite consensus disorder prediction 534 555 - -
Car05g02603 887 Pfam Dual specificity phosphatase, catalytic domain 706 839 IPR000340 GO:0008138|GO:0016311
Car05g02603 887 MobiDBLite consensus disorder prediction 557 571 - -
Car05g02603 887 Gene3D Protein tyrosine phosphatase superfamily 672 844 IPR029021 -
Car05g02603 887 MobiDBLite consensus disorder prediction 572 590 - -
Car05g02603 887 CDD DSP 699 836 - -
Car05g02603 887 Gene3D - 274 458 IPR036940 GO:0016301
Car05g02603 887 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 698 843 IPR029021 -
Car05g02603 887 SUPERFAMILY Protein kinase-like (PK-like) 63 432 IPR011009 -
Car05g02603 887 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 763 819 IPR000387 GO:0016311|GO:0016791
Car05g02603 887 PANTHER DUAL SPECIFICITY PHOSPHATASE FAMILY PROTEIN 40 879 - -
Car05g02603 887 Pfam Actin-fragmin kinase, catalytic 109 391 IPR015275 -
Car05g02603 887 MobiDBLite consensus disorder prediction 534 606 - -
Car05g02603 887 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 40 879 IPR035010 GO:0004721|GO:0009737|GO:0043622
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02603 Car-Chr5 71052713 71057410 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02603 31 867 Protein tyrosine phosphatase (PTP) family AT5G23720 60.844 0.0 992
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02603 K14165 - gmx:102661225 1206.05