Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02599 ATGTATTTTGCAAAACTCAACGATTCTCCCATGTTTCGGCAACAGCTTCAGGGTTTGGAAGAAAATTCAGAATCGTTACGTTCTAGATGCTGGAAATTCTACAAAGGATGTCGAAAGTACACGGAAGGGCTTGGAGAGGCATATGATGGAGACATTGCATTTGCAACTGCCCTTGAAAATTTTGGGGGAGGGCATAGTGATCCTCTATTTGTAACTTTGGGAGGACCTGTAATGACCAAATTTGCTATTGCTTTGAGGGAAATCAGTACACACAAGGAACTTCTTCGGTCACAGGTGGAGCATATGCTGAATGACCGGTTACTAAACATCCTAAATGTCGAAATCCTTGATGTCAAGGAAGCTCGGAGGCGTTTTGATAAAGCTTCCCTTCTATATGATCAGGCACGAGAGAAGTTTATGTCATTAAGAAAAAGCACAAAGTTTGATGTTGCTGCTGTCATAGAAGAGGAATTGCACAATGCAAGAACAACGTTTGAGGAAGCTCGTTTCAATCTGGTTGGTGCTCTTCATAATATTGAGGCTAAGAAGAGATTTGAGTTTTTGGAGGCTGTCACCGGAGTTATGGACGCTCATCTTCGATACTTTCAGCAGGGATATCAGCAGTTACAAGAGCTGGAGCCTTTCATTATTGAGGTTTTGGCTTATGCACAAAAAGCAAGAGAAAGTTACAATGAGGAGCAGATTTCTCTTTGTGAAAGAATGGTAGAGTACAAAAAACTAAGTTATCAAGAAAGTAGGTTGTCCTTGAATGGCCCTTATGGTTCTCCCAGAGGGGAAGGTGCGCATCTGCAACCCTTTTCTAGGAGATCAAATAGTGTGGTAGATGCAGTAGCTGAATCAGCTGCAAATGGAAAGGTTCGAGTCATTCGACAAGGTTTTCTTTCCAAACGTTCCTCCAATTTGAGGGGTGACTGGAAGAGAAGGTTTTTCGTTCTTGATAGTCGCGGAATGCTTTACTACTATCGTAAACCATTACATGGAAGTAGTCTCAATCAGCAATCTACACAGAGGAATTGTGCTGGAGAAAACAGTGCTGGCATTCTGAGTAGGCTGCTTTCTTCACATTACCATGAAGTTGTTCCTGATGAAAAATCTGTAGCGCGTCACACAGTGAATCTGCTGACATCAACAATCAAGGTTGATGCTGAGCAGTCAGATTTAAGGTTCTGCTTCAGGATTATTTCACCTTCAAAGATGTACACTTTGCAGGCAGAAAATGCTCTTGACCAGATGGATTGGATGGAAAAGATAAATGGAGTCATTGCCTCCTTGTTGTCTGTACAGACACTAGGTAGAATGTCTATATCAGCTGACTCAGAAAGCAGGGACAGCGACTCTTCCAGCAACTTCGACTTGTTACAAAGTTCTCAAGAGTATGATCGATTATTGAGTGCTGATTTTGCATCCAAGAATTCCACCACTAATAGATTATCTGAAGAGTTACAGAAGAATAAGCAGATTGTAAAAGTTGAACAGCCAATTGATATTCTAAGAAAGGTTAGCGGGAACGACAAATGTGCTGATTGTGGTAAACCTGAACCAGACTGGGCATCCTTAAACCTTGGAATCCTAGTATGCATTGAATGTTCCGGTGTTCATCGTAATCTTGGTGTACATATATCAAAAATAAGATCACTGAAACTTGATGTAAAAGTGTGGGATTACTCTGTATTAACAATGTTTCAATCGTTGGGAAATCTATTCGCAAACTCGGTTTGGGAGGAGCTTTTGCATTCAACAAGTAATTCACAAATTGATGAAACTCCTTATGGTTCATCAAAAGTTGATAGAAACAAATTATGCCATGCAAAAAAACCAGAACATGATGATCCTATTTCAATAAAGGAGAAATTCATTCATGCAAAGTATTCTGAGAAAGTCTTTGTTCGACGGATTCCTAAAAGCCACCATCTTCTTTCGGTGGGACAACAAGTGTTGGAATGCATCTATGCCAATGACAAGAAAGCCGTGTACCGCCATATTGTCAAATCGGATGCGGATGTCAATGCTGTTAGTGCAGAAGCATTATCCGGCTTTTTTTCTAATATGTCTCCAAGTGATTCAAACACATCTTCTAAAAGTAAAAGTCGGCTAATGGAGAACATACAAGAGGGTTCTAATGTGCTTCACTTGGCATGCCTAACGAGTGATGCCGGGATGATAGAACTGCTCTTACAGTACGGCGCAGATGTAAATGCTATCGATTCAAGAGGTCGGACACCGCTGCATTACTGCATTATGAGAGGGAAGACTACAACTTCAAAGTTGCTTATTACAAGGGGGGCAAATCCACTTGCTGTAGATAAAGAAGGCAACACTCCTCTAAAGCTTGCACCAGAACCCAGCGCTATTGGCAAAGACATTCTTACTCTCTTAACAAGCAGATGA 2409 0.411 MYFAKLNDSPMFRQQLQGLEENSESLRSRCWKFYKGCRKYTEGLGEAYDGDIAFATALENFGGGHSDPLFVTLGGPVMTKFAIALREISTHKELLRSQVEHMLNDRLLNILNVEILDVKEARRRFDKASLLYDQAREKFMSLRKSTKFDVAAVIEEELHNARTTFEEARFNLVGALHNIEAKKRFEFLEAVTGVMDAHLRYFQQGYQQLQELEPFIIEVLAYAQKARESYNEEQISLCERMVEYKKLSYQESRLSLNGPYGSPRGEGAHLQPFSRRSNSVVDAVAESAANGKVRVIRQGFLSKRSSNLRGDWKRRFFVLDSRGMLYYYRKPLHGSSLNQQSTQRNCAGENSAGILSRLLSSHYHEVVPDEKSVARHTVNLLTSTIKVDAEQSDLRFCFRIISPSKMYTLQAENALDQMDWMEKINGVIASLLSVQTLGRMSISADSESRDSDSSSNFDLLQSSQEYDRLLSADFASKNSTTNRLSEELQKNKQIVKVEQPIDILRKVSGNDKCADCGKPEPDWASLNLGILVCIECSGVHRNLGVHISKIRSLKLDVKVWDYSVLTMFQSLGNLFANSVWEELLHSTSNSQIDETPYGSSKVDRNKLCHAKKPEHDDPISIKEKFIHAKYSEKVFVRRIPKSHHLLSVGQQVLECIYANDKKAVYRHIVKSDADVNAVSAEALSGFFSNMSPSDSNTSSKSKSRLMENIQEGSNVLHLACLTSDAGMIELLLQYGADVNAIDSRGRTPLHYCIMRGKTTTSKLLITRGANPLAVDKEGNTPLKLAPEPSAIGKDILTLLTSR 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02599 802 Gene3D Arf GTPase activating protein 477 641 IPR038508 -
Car05g02599 802 CDD BAR_SFC_plant 15 215 IPR035670 -
Car05g02599 802 ProSiteProfiles ARF GTPase-activating proteins domain profile. 498 643 IPR001164 GO:0005096
Car05g02599 802 SUPERFAMILY Ankyrin repeat 649 786 IPR036770 -
Car05g02599 802 Gene3D Arfaptin homology (AH) domain/BAR domain 4 250 IPR027267 -
Car05g02599 802 Pfam PH domain 295 428 IPR001849 -
Car05g02599 802 PANTHER CENTAURIN/ARF 1 800 IPR045258 GO:0005096
Car05g02599 802 Gene3D - 642 799 IPR036770 -
Car05g02599 802 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD1 1 800 - -
Car05g02599 802 CDD ArfGap 501 630 - -
Car05g02599 802 SUPERFAMILY PH domain-like 295 450 - -
Car05g02599 802 SUPERFAMILY BAR/IMD domain-like 6 317 IPR027267 -
Car05g02599 802 Gene3D - 287 439 IPR011993 -
Car05g02599 802 ProSiteProfiles Ankyrin repeat profile. 711 743 IPR002110 GO:0005515
Car05g02599 802 SMART 5bar 5 218 IPR004148 GO:0005515|GO:0005737
Car05g02599 802 Pfam BAR domain of APPL family 6 233 - -
Car05g02599 802 Pfam Putative GTPase activating protein for Arf 501 637 IPR001164 GO:0005096
Car05g02599 802 Pfam Ankyrin repeats (3 copies) 716 785 IPR002110 GO:0005515
Car05g02599 802 SMART ANK_2a 744 773 IPR002110 GO:0005515
Car05g02599 802 SMART ANK_2a 711 740 IPR002110 GO:0005515
Car05g02599 802 SUPERFAMILY ArfGap/RecO-like zinc finger 498 638 IPR037278 -
Car05g02599 802 Coils Coil 118 138 - -
Car05g02599 802 SMART PH_update 295 431 IPR001849 -
Car05g02599 802 ProSiteProfiles Ankyrin repeat profile. 744 776 IPR002110 GO:0005515
Car05g02599 802 CDD PH_ACAP 297 433 - -
Car05g02599 802 ProSiteProfiles PH domain profile. 294 429 IPR001849 -
Car05g02599 802 ProSiteProfiles Ankyrin repeat region circular profile. 744 770 - -
Car05g02599 802 ProSiteProfiles Ankyrin repeat region circular profile. 711 742 - -
Car05g02599 802 SMART arf_gap_3 498 643 IPR001164 GO:0005096
Car05g02599 802 PRINTS HIV Rev interacting protein signature 510 529 IPR001164 GO:0005096
Car05g02599 802 PRINTS HIV Rev interacting protein signature 529 546 IPR001164 GO:0005096
Car05g02599 802 PRINTS HIV Rev interacting protein signature 552 573 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02599 Car-Chr5 71020272 71026094 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02599 501 650 C2H2 Transcription Factor Family AT3G07940 36.667 1.67e-20 90.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02599 05 71020272 71026094 Car05g02599 05 71020272 71026094 ECH