Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02593 atggataaaaagaataaaagtagttgggaagaagaagaagaagaagaggaggagaaTTTATTTCCAGTATTTTCTGAAAGGTCAGAGCAAGATATGTCAGCTATAGTATCTGCCCTTACTCAAGTCATGGGCGGCAACAATAATAATAGTGACATGCATCAATCTTCTAATTCCCACTCAAATTTTATCCATaataataatatcaatcaacaacaaccacagcaacaagaacaagatcaaGGGAGTGAAAGAAGAAGACACTATAGAGGAGTGAGACAGAGGCCATGGGGAAAATGGGCTGCAGAGATTAGGGATCCGAAGAAGGCGGCTAGGGTTTGGCTTGGAACCTTTGAAACTGCTGAGGCTGCAGCTGTTGCCTATGATGAAGCTGCTCTGAGATTCAAAGGAAGCAAAGCTAAACTCAATTTTCCAGAAAGGGTTCAAAGTTCAACAGATCAATTTGCATACCACCAGCTTCAACAACAATCTGTTCCACACTTTTCTCAACAAACATATCCAAATATTATTCCTTTTCACCCTCCTTCTGCTAGTAACAACTTCAATCATGATAATATGCTTCGTTTCTATCACCAATTATCAACTGCAtcttcttcttcttcttcttcttctGGTTTATCTCAGCAGCAGCAACAAGAGCTTCTCAGATTGTCAATGCAATTTGGTGGttcctcttcttcttcttctaattcagcttctGACCCTGCTAGGAATTGGAGGGATGACATGGATCGATGA 756 0.3294 MDKKNKSSWEEEEEEEEENLFPVFSERSEQDMSAIVSALTQVMGGNNNNSDMHQSSNSHSNFIHNNNINQQQPQQQEQDQGSERRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEAAAVAYDEAALRFKGSKAKLNFPERVQSSTDQFAYHQLQQQSVPHFSQQTYPNIIPFHPPSASNNFNHDNMLRFYHQLSTASSSSSSSSGLSQQQQQELLRLSMQFGGSSSSSSNSASDPARNWRDDMDR 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02593 251 PRINTS Ethylene responsive element binding protein signature 88 99 IPR001471 GO:0003700|GO:0006355
Car05g02593 251 PRINTS Ethylene responsive element binding protein signature 110 126 IPR001471 GO:0003700|GO:0006355
Car05g02593 251 MobiDBLite consensus disorder prediction 204 251 - -
Car05g02593 251 Pfam AP2 domain 87 136 IPR001471 GO:0003700|GO:0006355
Car05g02593 251 ProSiteProfiles AP2/ERF domain profile. 87 144 IPR001471 GO:0003700|GO:0006355
Car05g02593 251 Gene3D AP2/ERF domain 86 146 IPR036955 GO:0003700|GO:0006355
Car05g02593 251 MobiDBLite consensus disorder prediction 30 78 - -
Car05g02593 251 PANTHER DNA-BINDING DOMAIN 6 239 IPR044808 GO:0003700|GO:0009873
Car05g02593 251 SMART rav1_2 87 150 IPR001471 GO:0003700|GO:0006355
Car05g02593 251 SUPERFAMILY DNA-binding domain 87 145 IPR016177 GO:0003677
Car05g02593 251 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF110 6 239 - -
Car05g02593 251 MobiDBLite consensus disorder prediction 1 91 - -
Car05g02593 251 MobiDBLite consensus disorder prediction 204 242 - -
Car05g02593 251 CDD AP2 87 145 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02593 Car-Chr5 70950433 70952078 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02593 19 169 AP2-EREBP Transcription Factor Family AT5G61890 62.424 1.19e-60 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Car05g02593 AP2 3.9e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02593 - - gmx:100787091 211.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02593 05 70950433 70952078 Car05g02593 05 70950433 70952078 ECH