Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02592 ATGGATCCCGACGCATTCACCGCCAGCTTATTCAAGTGGGACCCACGCACCGTCCTTCCAACTGCTCCATCCCTCCGTCCCCAACTTCTCGACTACACTGTTTCCCCTCCAACAACCGCTCCTCTCCCTTACCATCCACCTCGATTACCTAGGGAACTCGGTGGCTTGGAGGAACTGTTCCAAGCTTACGGTATCAGATACTACACGGCGGCCAAGATAGCGGAGCTTGGTTTCACGGTCAGCACGCTGGTTGACATGAAAGACGAAGAGTTAGACGATATGATGAACAGCCTATCCCAAATTTTCCGGTGGGATCTCCTCGTCGGAGAACGTTACGGCATCAAAGCTGCCATTAGAGCCGAAAGAAGACGCCTCGACGATGAAGAAATTAAACGACGCAGTCTTCTCTCCGGCGATACCACCAACGCACTCGACGCTCTCTCTCAAGAAGGTTTGTCGGAGGAGCCGGTGGTGCAAAGAGAAAAGGAGGCGGTGGGAAGTGGAGGAGGGAGTACGTGGGAGGTAGCTGTGGCGGAGGAGAGAAGGAAGCGACAGCAGATAAGGAGGAGGAGAATGAGGATGAAGTCAAACGTTGACCGTGATGagaatgaggaaggggaagaggaagaagaagaTAACAACAGCGGCGGCGGTGGTGGTGAGAGGCAGAGAGAACATCCATTCATCGTGACGGAGCCTGGTGAAGTTGCACGTGGCAAAAAGAACGGTCTAGATTATCTGTTTCATCTCTACGAACAATGCCGTGAGTTCTTGATTCAGGTTCAAGCCATTGCTAAAGAGCGCGGTGAAAAATGCCCCACCAAGGTGACGAATCAGGTATTTAGGTATGCGAAGAAAGCTGGAGCGAGCTATATCAATAAGCCGAAAATGAGACACTACGTTCACTGTTACGCGTTGCATTGTTTAGATGAGGAGGTTTCGAATGAGTTGAGAAGGGGGTTTAAAGAAAGAGGGGAGAACGTAGGCGCGTGGAGGCAAGCGTGTTACAAACCACTTGTGGCGATTGCTGCACGTCAAGGATGGGATATTGATGCTATATTCAACGCGCATCCACGTCTTTCTATATGGTACGTGCCAACCAAACTCCGTCAGCTTTGTCACGCTGAGAGGAACAACGCAGCTGCTTCAAGCTCCGTCTCTGTTGGAACTGCTCACCTTCCTTTCTAA 1188 0.5 MDPDAFTASLFKWDPRTVLPTAPSLRPQLLDYTVSPPTTAPLPYHPPRLPRELGGLEELFQAYGIRYYTAAKIAELGFTVSTLVDMKDEELDDMMNSLSQIFRWDLLVGERYGIKAAIRAERRRLDDEEIKRRSLLSGDTTNALDALSQEGLSEEPVVQREKEAVGSGGGSTWEVAVAEERRKRQQIRRRRMRMKSNVDRDENEEGEEEEEDNNSGGGGGERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLIQVQAIAKERGEKCPTKVTNQVFRYAKKAGASYINKPKMRHYVHCYALHCLDEEVSNELRRGFKERGENVGAWRQACYKPLVAIAARQGWDIDAIFNAHPRLSIWYVPTKLRQLCHAERNNAAASSSVSVGTAHLPF 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02592 395 Coils Coil 177 204 - -
Car05g02592 395 MobiDBLite consensus disorder prediction 184 225 - -
Car05g02592 395 Gene3D Protein LEAFY 218 387 IPR038276 -
Car05g02592 395 Pfam Floricaula / Leafy protein SAM domain 52 129 IPR035079 -
Car05g02592 395 PANTHER PROTEIN LEAFY 1 395 IPR002910 GO:0003677|GO:0006355
Car05g02592 395 MobiDBLite consensus disorder prediction 148 171 - -
Car05g02592 395 Pfam DNA Binding Domain (C-terminal) Leafy/Floricaula 215 381 IPR035209 GO:0003677
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02592 1 389 Orphan Transcription Factor Family AT5G61850 66.829 5.46e-164 465
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LFY Car05g02592 C_LFY_FLO 8.2e-110 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02592 05 70933647 70936059 Car05g02592 05 70933647 70936059 ECH