Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02572 atgtccaaatcaaacactacgagcaacacagtagcaccacaaccaccaaaacccaCATGGGTTCTCCCATATGTAACAGAGAATCTCCGTGAAGTATACACACTTGGTAGAAAACTCGGTCAAGGTCAATTTGGAACCACATATCTCTGCAGACACAACACAACTAGTCACACCTACGCCTGCAAATCCATCCCAAAGAAGAAACTTTTATGCAAAGAGGATTATGATGATGTTTGGAGAGAGATTCAGATAATGCACCATTTATCTGAACACCCCAATGTTGTGAGGATCCATGGTACTTATGAAGATTCATTTTCTGTTCACTTGGTTATGGAGATTTGTGAAGGTGGTGAGTTGTTTGATAGGATTGTTCAAAAGGGGCATTATAGTGAGAGACAAGCTGCTAAGTTGATTAGAACTATTGTTGAGGTTGTTGAAGCTTGTCATTCTCTTGGTGTTATGCATAGAGACCTTAAACCTGAGAATTTTTTGTTTGATACTGTTGAAGAAGATGCTCTTCTCAAAACTATTGATTTTGGTTTGTCTGTTTTTTACAAGCCAGGTGAAACATTTAGCGACGTTGTTGGAAGTCCGTACTACGTTGCACCTGAGGTCTTGCGCAAGCATTATGGACCTGAAGCAGACGTGTGGAGTGCCGGGGTTATTTTGTACATCTTATTAAGCGGGGTGCCACCATTTTGGGCCGAAACTGAGCAGGGAATCTTCAGACAGATTATGCAGGGAAGACTTGATTTCCAGTCTGAGCCATGGCCTGGGATTTCAGACAGCGCCCAGGATCTGATTCGAAAAATGCTTGACAGGAATCCAAAAACTAGGTTTACAGCCCACCAAGTACTTTGCCATCCGTGGATTGTGGATGACAACATTGCACCAGATAAACCTCTTGATTCTGCTGTTTTATCTCGCTTGAAGCAGTTCTCTGCGATGAATAAACTTAAAAAGATGGCTTTACGTGTTATTGCGGAGAGGCTTTCTGAGGAAGAAATTGGTGGTCTGAAGGAGTTATTCAGGATGATTGATGCTGACAATAGTGGAACTATAACATTCGATGAGCTAAAAGAAGGCTTAAAGCGAGTAGGAACTGAACTTATGGAGTCTGAAATCAAGGATCTTATGGATGCAGCAGATATTGATAATAACGGGACACTTGACTATGGAGAATTCATTGCTGCTACTGTCCACTTAAATAAGCTGGAGAGAGAGGAAAATCTGTTGTCAGCATTCTCCTACTTTGACAAAGATGGAAGTGGTTACATAACCATTGACGAGATACAAGAAGCTTGTAAGGAGTTTGGTTTGGATGATGTCCATATTGATGAAATGGTCAAGGAAATCGATCAAGACAATGATGGACAAATAGATTATGGGGAATTTGCTGCCATGATGAGAAAGGGCAATGGAGGGATCGGAAGGCGAACCATGAGAAGTACACTCAATTTCAGAGATGCTCTGGGAGTCATAGGCAACAGATCCAATTAA 1500 0.4 MSKSNTTSNTVAPQPPKPTWVLPYVTENLREVYTLGRKLGQGQFGTTYLCRHNTTSHTYACKSIPKKKLLCKEDYDDVWREIQIMHHLSEHPNVVRIHGTYEDSFSVHLVMEICEGGELFDRIVQKGHYSERQAAKLIRTIVEVVEACHSLGVMHRDLKPENFLFDTVEEDALLKTIDFGLSVFYKPGETFSDVVGSPYYVAPEVLRKHYGPEADVWSAGVILYILLSGVPPFWAETEQGIFRQIMQGRLDFQSEPWPGISDSAQDLIRKMLDRNPKTRFTAHQVLCHPWIVDDNIAPDKPLDSAVLSRLKQFSAMNKLKKMALRVIAERLSEEEIGGLKELFRMIDADNSGTITFDELKEGLKRVGTELMESEIKDLMDAADIDNNGTLDYGEFIAATVHLNKLEREENLLSAFSYFDKDGSGYITIDEIQEACKEFGLDDVHIDEMVKEIDQDNDGQIDYGEFAAMMRKGNGGIGRRTMRSTLNFRDALGVIGNRSN 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02572 499 ProSitePatterns Protein kinases ATP-binding region signature. 39 67 IPR017441 GO:0005524
Car05g02572 499 ProSitePatterns EF-hand calcium-binding domain. 383 395 IPR018247 -
Car05g02572 499 SMART serkin_6 33 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g02572 499 SUPERFAMILY Protein kinase-like (PK-like) 17 310 IPR011009 -
Car05g02572 499 Gene3D Transferase(Phosphotransferase) domain 1 120 331 - -
Car05g02572 499 ProSitePatterns Serine/Threonine protein kinases active-site signature. 153 165 IPR008271 GO:0004672|GO:0006468
Car05g02572 499 ProSiteProfiles EF-hand calcium-binding domain profile. 370 405 IPR002048 GO:0005509
Car05g02572 499 ProSiteProfiles EF-hand calcium-binding domain profile. 444 475 IPR002048 GO:0005509
Car05g02572 499 CDD EFh 339 398 IPR002048 GO:0005509
Car05g02572 499 Pfam EF-hand domain pair 409 470 IPR002048 GO:0005509
Car05g02572 499 ProSitePatterns EF-hand calcium-binding domain. 347 359 IPR018247 -
Car05g02572 499 ProSiteProfiles Protein kinase domain profile. 33 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g02572 499 PANTHER CDPK-RELATED KINASE 11 482 - -
Car05g02572 499 ProSiteProfiles EF-hand calcium-binding domain profile. 334 369 IPR002048 GO:0005509
Car05g02572 499 Pfam EF-hand domain pair 351 401 IPR002048 GO:0005509
Car05g02572 499 Gene3D Phosphorylase Kinase; domain 1 35 119 - -
Car05g02572 499 ProSiteProfiles EF-hand calcium-binding domain profile. 406 441 IPR002048 GO:0005509
Car05g02572 499 SMART efh_1 338 366 IPR002048 GO:0005509
Car05g02572 499 SMART efh_1 374 402 IPR002048 GO:0005509
Car05g02572 499 SMART efh_1 410 438 IPR002048 GO:0005509
Car05g02572 499 SMART efh_1 444 472 IPR002048 GO:0005509
Car05g02572 499 Gene3D - 332 403 - -
Car05g02572 499 SUPERFAMILY EF-hand 330 471 IPR011992 -
Car05g02572 499 ProSitePatterns EF-hand calcium-binding domain. 453 465 IPR018247 -
Car05g02572 499 CDD STKc_CAMK 32 290 - -
Car05g02572 499 Coils Coil 497 499 - -
Car05g02572 499 Gene3D - 404 499 - -
Car05g02572 499 PANTHER SERINE/THREONINE-PROTEIN KINASE 11 482 - -
Car05g02572 499 ProSitePatterns EF-hand calcium-binding domain. 419 431 IPR018247 -
Car05g02572 499 Pfam Protein kinase domain 33 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02572 Car-Chr5 70777265 70781572 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02572 13 499 EF-hand Containing Proteins AT1G35670 76.578 0.0 791
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Car05g02572 Pkinase 3.5e-77 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02572 K13412 - gmx:100790443 931.398