Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02570 ATGGAAGGATGGAATGTTTATCGTCGGAAGACATTGATTGGTCAGCATGGGGAAGATGGAAGTTATTTTCCTTCTGTTACTGTTAAAGTAGAGGAACCAGATAACGAAGAAGGAAACATAAAAAATGAACCTGTCTTCTTTCCAGATGTTAAGAAAAGGAAGCGCCTCAGTCTTAGTCAGCTTAAAGAGGTGAAAGCGGAGTCTTGTTGGACACAAAGCAGTGGAAAGACTAAGACAAAGAGGCATGATTGTAGGGATAGATGGTCAGGCGAGAGGTACAAGTTGGCGGAGCAAAGCATGTGGGAGGTGTTGAAGGCAGAGGGTGCGACATTTGAAAACCCAATAAGCCGACCTGCATTGAGATTGGCCGCCCGTAAATACATTGGTGATACTGGACTTCTAGACCACTTACTGAAGCACATTGATGGTAAAGTGGCACCTGGTGGGTCTGACCGGTTCCGGAGATGGTTCAACACCAACGGAGTAATGGAGTATTGGTTGGAGAGTGCAGACTTGGATAAGGTCCGCGAGGAGGCAGGGGTGCTGGACACATACTGGATACCACCATCCACTGTTAGGGAAGGCCATGCCTCTCGTCAGGATACTGATTCTTCTGATGAATTGAAACAGCTTAAAATTGAAATGGCCCAAATGAAGAAAGATTTGCAGGGTCTCATTGTCAAGAAGCAAAATAAAATTCAAAGTAACGTGATGGAGGAGACTCACAAGGAATTCATGAAGTGGAAAGCTATAACTGACCATCGCCTAACTGAAATCATGGCTTCTTTGAATAATGTGCAGGGCAAGTATGATGAATTGGCGATTTGGAAAACTAGAGTGGAGCAGCATCTTATGGAAATAACAAATAAATTGAATGATCTTCAAGCACGAAGAGAATGCAACACTTCTAGTCCTCCTTCAGAAAATTGGAAAGATTGGTTAGAAGGCACTAACCAAGACACTATTCAGGAAGATGCATTGGTAACTTGGATCGAGAGTTCAGCACTACTTAATGATCCACAAGGAGGTTTACTTCAAGTTCCCTACTCAGGGATACCAACTCAGCTATTCAATGAAGAACTGACTAACAAGAAAAGTGATATTGTGGAGTTGATGCCCACAAGGCAAGAAGATCAACCTAACGTGACCCCAGATTCTTCTACAACTGTTAATTCAAAGTCAGACATGGACAACTCACTGATAACGTTTCAGGACATGTTTATGGATTTACTCAAATGGAGAGAAAAAATGGAGCAGCAGCTGTTGGATGTATCAAACACTGTATATGGCATTCTAGCAATGAAGTAG 1308 0.4274 MEGWNVYRRKTLIGQHGEDGSYFPSVTVKVEEPDNEEGNIKNEPVFFPDVKKRKRLSLSQLKEVKAESCWTQSSGKTKTKRHDCRDRWSGERYKLAEQSMWEVLKAEGATFENPISRPALRLAARKYIGDTGLLDHLLKHIDGKVAPGGSDRFRRWFNTNGVMEYWLESADLDKVREEAGVLDTYWIPPSTVREGHASRQDTDSSDELKQLKIEMAQMKKDLQGLIVKKQNKIQSNVMEETHKEFMKWKAITDHRLTEIMASLNNVQGKYDELAIWKTRVEQHLMEITNKLNDLQARRECNTSSPPSENWKDWLEGTNQDTIQEDALVTWIESSALLNDPQGGLLQVPYSGIPTQLFNEELTNKKSDIVELMPTRQEDQPNVTPDSSTTVNSKSDMDNSLITFQDMFMDLLKWREKMEQQLLDVSNTVYGILAMK 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02570 435 Coils Coil 277 297 - -
Car05g02570 435 PANTHER PROTEIN DYAD 4 433 IPR044221 GO:0007131|GO:0051177|GO:0051321
Car05g02570 435 Coils Coil 208 228 - -
Car05g02570 435 PANTHER DYAD PROTEIN 4 433 - -
Car05g02570 435 MobiDBLite consensus disorder prediction 374 393 - -
Car05g02570 435 MobiDBLite consensus disorder prediction 376 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02570 Car-Chr5 70752500 70756097 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02570 87 168 PHD Transcription Factor Family AT5G22260 43.373 1.00e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02570 - - gmx:100806484 625.935