Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02569 ATGTCCAGTTTTCACGTCGGCGGCAAGGTGGTAGATAAAGTCGATTTACTGAGAAAGAAGCACTGGCCATGGCGCTTAGACGTTTGGCCTTTCGCTATTTTATACGCCGCCTGGGTTTCAACTATTTTTCCCAGTCTTGATTTCATCGATGCCGCTATTGTTTTCGGTGCACTCGCTTCTCTTCACATCCTCGTCTGTCTCTTCACCGGTTGGTCCGTTGATTTCAAATGTTTTGCATATTACAGCAAGGTTAAAAATATTGATCAGGCTGATTCTTGCAAAATTACTCCGGCCAAATTTTCTGGTTCTAAAGAAGTTGTGCTGCTTCATTCTCGAAAATCATCTACAGGTTCTTCATCAGCAGTGGATCTGGAAGAGATTTACTTTGATTTTAGAAAACAATGTTTTGTTTATTCAAAGGAGAAGGGGACTTTTTGCAAACTCTCCTACCCTACCAAGGAAACATTTGGATATTATCTCAAGAGTAGTGGCCATGGCTCCGAAGCCAAAGTTCTTGCCGCTACTGAGAAATGGGGGCGGAATGTATTTGATTATCCTCAGCCAACATTTCAGAAATTGATGAAAGAGCACTGCATGGAACCTTTTTTCGTATTTCAGGTTTTCTGTGTTGGTCTTTGGTGTTTGGACGAATATTGGTACTATAGTTTGTTCACTCTATTCATGCTGTTTATGTTTGAGTCAACCATGGCAAAAAGTCGGTTGAGGACTCTGACTGAGTTAAGACGCGTGAGAGTAGATAATCAGATAGTGATGGTACATCGTGGTGGCAAGTGGGTAAAACTCTCTGGAACAGACCTTTTGCCTGGGGATGTTATCTCTATAGGTCGCTCTTCTGGTCAGAACGGGGAGGAGAAATCTGTACCTGCAGACATGCTTATATTGGCTGGAAGTGCAATTGTGAATGAAGCCATTCTCACAGGCGAGTCTACTCCTCAATGGAAGATTTCTATTGCGGGTAGGGGGATGGAAGAGAAGTTGTCAGCAAAGCGAGACAAAGCCCATGTTTTATTTGGTGGAACTAAAATATTGCAGCACTCTCCAGACAAGACCTTTCCTCTAAAAACACCTGATGGTGGCTGCTTGGCTGTTGTCCTGAGAACGGGTTTCGAAACAAGTCAAGGAAAGTTGATGCGAACAATCTTATTCTCTACAGAAAGGGTGACTGCTAATAGCTGGGAAAGTGGATTGTTCATTTTATTCTTGGTTGTATTTGCTCTAATTGCAGCCGGTTATGTTCTTATTAAGGGGCTAGAAGACGCCTCAAGGAGCAAGTATAAACTTATACTAAGTTGTTCTCTTATTGTTACTTCTGTGATACCTCCTGAATTACCAATGGAATTATCAATAGCCGTTAATACTTCTCTGATTGCACTGGCACGCCGTGGAATTTTTTGCACAGAACCTTTTCGAATACCATTTGCTGGGAAGGTTGATATATGTTGTTTTGACAAGACTGGGACACTTACATCCGATGACATGGAATTTTCTGGAGTTGTTGGGTTGGCAGAAACTACAGATTTGGAATCTGATATGAGTAGAGTGCCTGCGAGAACAGTAGAAATCCTGGCTTCTTGCCATGCATTGGTATTTGTTGAGAATAAGCTGGTTGGTGATCCTCTTGAGAAGGCTGCACTTAAAGGAATCGATTGGAGTTATAAATCTGATGAGAAGGCTGTTCCTAAAAGGGGAAATGGCCATCCCGTCCAAATTGTTCAGCGATACCATTTTGCATCTCACTTAAAACGAATGGCAGTTGTTGTTCGTATTCAGGAGGAATTTTTTGCATTTGTGAAGGGTGCCCCAGAAATTATACAAGACAGGCTCATTAATGTACCTCAATCATATGTTGAGACCTACAAAAAATATACACGTCAGGGGTCTCGAGTTCTTGCTCTGGCTCACAAGTCTCTTTCGGATATGACAGTCAGTGAAGCCAGAAGCTTGGATAGGGATATGGTGGAGAGTGGACTTACTTTTGCTGGTTTTGTGGTATTTAATTGTCCCATAAGATCAGATTCCGCTACTGTTTTATCTGGATTGAAAGAATCTTCTCATGACTTGGTGATGATTACTGGTGACCAAGCTTTGACAGCCTGCCATGTTGCTAGCCAAGTTCATATCATATCAAAACCAGCATTAATCCTTAGTCCAGCAAGTAATGGTGGAGGATATAATTGGCTGTCCCCTGATGAGAATGAAAACATTCGCTACAGTGACAAAGAGGTTGAATCTTTGTCAGAGACTCATGATCTATGTATTGGAGGTGATTGCTTTGAGATGTTGCAACAGACATCAGCTCATCTTCTAGTCATTCCTTATGTGAAGGTTTTTGCTAGAGTTGCTCCTGAGCAAAAGGAACTTATCCTGACCACTTTCAAAACAGTGGGACGGGTAACTTTGATGTGTGGGGATGGAACCAATGATGTTGGAGCTTTGAAGCAGGCCCACGTAGGAGTTGCTCTTCTGAATGCAATGCCTCCAACTCAAGGTGGAAACTCCTCTTCAGGTGCATCTGGGGAAGACGGTTCTAAATCTGTTAAGCAGAAGAAATCTAAGCCTGCACTGGAAACATCTGGAAAGACGGTTAGCCCTACTGGAGAAGGCACTTCAAAATCCAAAGTTGCTTCAAAATCAGACTCCACTAGTCATTCATCTCTTAACCGTCATCAAACAGCTGTTGAGATGCAAAGGCAGAAGCTTAAGAAGATGATGGATGAGCTTAATGAGGAAGGAGATGGCCGTGCACCCATTGTCAAGCTTGGTGATGCCTCAATGGCATCCCCATTCACTGCAAAGCATGCATCTGTTTGTCCCACCACTGACATAATTCGACAAGGCCGGAGTACCCTAGTGACAACCCTCCAGATGTTTAAAATTCTGGGCCTCAACTGCCTTGCTACTGCATATGTGTTGAGTGTTATGTATCTGGATGGTGTCAAGCTAGGTGATGTCCAAGCCACAATAAGCGGCGTCTTCACTGCTGCATTTTTCCTCTTTATTTCACATGCACGTCCTCTTCCCACTCTCTCAGCAGAACGGCCCCACCCCAACATCTTCTGTGCTTATGTTTTGCTTTCCCTCTTGGGACAATTTTCTGTTCACCTATTTTTTCTGATGAAATCTGTCAAAGAAGCTGAAAAATACATGCCAGATGAATGTATTGAACCAGATTCAGATTTTCATCCCAACCTGGTAAATACTGTTTCCTACATGGTGAGTATGATGCTTCAGGTGGCCACATTTGCTGTGAACTATATGGGCCATCCCTTCAACCAAAGTATTCCCGAAAACAAACCGTTCCTGTATGCCCTTGTTGCTGCTGTCGGTTTCTTTACTGTGATAACATCTGATCTCTTCAGGGATTTAAATGACTGGTTGAAGTTGGTGCCATTGCCAGCGGGTTTGAGGGATAAACTATTGATTTGGGCTTTTCTAATGTTTTTGGTATGCTACTCATGGGAGAGACTGTTGAGGTGGGCTTTTCCTGGTAAGGTCCCAGCTTGGAAGAGACGACAACAGGTTGCTGTGTCTAATTTAGAAAAGAAGAAACAGCTTTAA 3579 0.4292 MSSFHVGGKVVDKVDLLRKKHWPWRLDVWPFAILYAAWVSTIFPSLDFIDAAIVFGALASLHILVCLFTGWSVDFKCFAYYSKVKNIDQADSCKITPAKFSGSKEVVLLHSRKSSTGSSSAVDLEEIYFDFRKQCFVYSKEKGTFCKLSYPTKETFGYYLKSSGHGSEAKVLAATEKWGRNVFDYPQPTFQKLMKEHCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLRTLTELRRVRVDNQIVMVHRGGKWVKLSGTDLLPGDVISIGRSSGQNGEEKSVPADMLILAGSAIVNEAILTGESTPQWKISIAGRGMEEKLSAKRDKAHVLFGGTKILQHSPDKTFPLKTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFALIAAGYVLIKGLEDASRSKYKLILSCSLIVTSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAGKVDICCFDKTGTLTSDDMEFSGVVGLAETTDLESDMSRVPARTVEILASCHALVFVENKLVGDPLEKAALKGIDWSYKSDEKAVPKRGNGHPVQIVQRYHFASHLKRMAVVVRIQEEFFAFVKGAPEIIQDRLINVPQSYVETYKKYTRQGSRVLALAHKSLSDMTVSEARSLDRDMVESGLTFAGFVVFNCPIRSDSATVLSGLKESSHDLVMITGDQALTACHVASQVHIISKPALILSPASNGGGYNWLSPDENENIRYSDKEVESLSETHDLCIGGDCFEMLQQTSAHLLVIPYVKVFARVAPEQKELILTTFKTVGRVTLMCGDGTNDVGALKQAHVGVALLNAMPPTQGGNSSSGASGEDGSKSVKQKKSKPALETSGKTVSPTGEGTSKSKVASKSDSTSHSSLNRHQTAVEMQRQKLKKMMDELNEEGDGRAPIVKLGDASMASPFTAKHASVCPTTDIIRQGRSTLVTTLQMFKILGLNCLATAYVLSVMYLDGVKLGDVQATISGVFTAAFFLFISHARPLPTLSAERPHPNIFCAYVLLSLLGQFSVHLFFLMKSVKEAEKYMPDECIEPDSDFHPNLVNTVSYMVSMMLQVATFAVNYMGHPFNQSIPENKPFLYALVAAVGFFTVITSDLFRDLNDWLKLVPLPAGLRDKLLIWAFLMFLVCYSWERLLRWAFPGKVPAWKRRQQVAVSNLEKKKQL 1192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02569 1192 SUPERFAMILY Calcium ATPase, transmembrane domain M 166 1169 IPR023298 -
Car05g02569 1192 Gene3D - 483 668 IPR023299 GO:0000166
Car05g02569 1192 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 403 511 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Car05g02569 1192 Coils Coil 893 917 - -
Car05g02569 1192 PANTHER CATION-TRANSPORTING ATPASE 1 1183 - -
Car05g02569 1192 TIGRFAM P-ATPase-V: P-type ATPase of unknown pump specificity (type V) 44 1149 IPR006544 GO:0006812|GO:0016021|GO:0019829|GO:0140358
Car05g02569 1192 Pfam haloacid dehalogenase-like hydrolase 485 713 - -
Car05g02569 1192 ProSitePatterns Hypothetical cof family signature 2. 809 831 - -
Car05g02569 1192 Gene3D - 669 839 IPR023214 -
Car05g02569 1192 SFLD p-type atpase 469 955 IPR044492 -
Car05g02569 1192 MobiDBLite consensus disorder prediction 862 900 - -
Car05g02569 1192 MobiDBLite consensus disorder prediction 831 902 - -
Car05g02569 1192 PANTHER CATION-TRANSPORTING ATPASE-RELATED 1 1183 - -
Car05g02569 1192 SUPERFAMILY Calcium ATPase, transduction domain A 255 387 IPR008250 -
Car05g02569 1192 Pfam E1-E2 ATPase 256 468 - -
Car05g02569 1192 ProSitePatterns E1-E2 ATPases phosphorylation site. 490 496 IPR018303 -
Car05g02569 1192 Gene3D - 224 388 - -
Car05g02569 1192 SFLD C1.7: P-type atpase like 469 955 - -
Car05g02569 1192 PRINTS P-type cation-transporting ATPase superfamily signature 308 322 - -
Car05g02569 1192 PRINTS P-type cation-transporting ATPase superfamily signature 488 502 - -
Car05g02569 1192 PRINTS P-type cation-transporting ATPase superfamily signature 690 700 - -
Car05g02569 1192 PRINTS P-type cation-transporting ATPase superfamily signature 809 828 - -
Car05g02569 1192 CDD P-type_ATPase_cation 170 1107 - -
Car05g02569 1192 MobiDBLite consensus disorder prediction 833 849 - -
Car05g02569 1192 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 494 678 IPR023299 GO:0000166
Car05g02569 1192 SUPERFAMILY HAD-like 483 834 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02569 Car-Chr5 70734452 70747425 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02569 1 1192 Primary Pumps ATPases AT5G23630 77.490 0.0 1917
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02569 K14950 - gmx:100789385 2173.67