Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02566 ATGGAGAGGAAATCACTTGCCCTGCTCATCTTGCTCTTCATTGCCTTTGCCTCACCAGAAATGGTGATGAAGACTGCAGAGGGAAGAGTGTGTGCGTCACAGAGCCACGCATTCAAAGGGCCATGTGTTGGTGACCATAACTGTGCACTTGTTTGTAGGAACGAAGGTTTCTCTGGTGGCAATTGCCAAGGCTTCCGTCGTCGTTGCTTTTGTACCAAGCTTTGTTGA 228 0.4912 MERKSLALLILLFIAFASPEMVMKTAEGRVCASQSHAFKGPCVGDHNCALVCRNEGFSGGNCQGFRRRCFCTKLC 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02566 75 SUPERFAMILY Scorpion toxin-like 29 75 IPR036574 -
Car05g02566 75 PRINTS Purothionin signature 30 45 IPR008176 GO:0006952
Car05g02566 75 PRINTS Purothionin signature 60 74 IPR008176 GO:0006952
Car05g02566 75 PANTHER DEFENSIN-LIKE PROTEIN 1 1 75 - -
Car05g02566 75 ProSitePatterns Gamma-thionins family signature. 29 52 IPR008176 GO:0006952
Car05g02566 75 Gene3D - 29 75 IPR036574 -
Car05g02566 75 PANTHER DEFENSIN-LIKE PROTEIN 1 75 - -
Car05g02566 75 SMART gth_4 30 75 IPR003614 GO:0006952
Car05g02566 75 CDD Knot1 40 72 IPR003614 GO:0006952
Car05g02566 75 Pfam Gamma-thionin family 29 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02566 Car-Chr5 70709991 70710858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02566 1 75 Plant Defensins Gene Families AT5G63660 57.333 4.45e-27 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02566 - - zju:107415774 117.472