Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02562 ATGGACAAGTACGAGGCTGTTAAGGATTTAGGTTCTGGCAATTTTGGGGTTGCTAGGCTTATGAGGAACAAGGTCACCAAGGAACTCGTCGCCATGAAATACATCGAGCGTGGTCACAAGattgatgagaacgtggcaagagagatcatgaatcacaggtcccttcggcatccgaatattattcgattcaaggagGtgattttgactcccacacatttagcaatagtgatggagtatgcagccggaggagaactctttgagaggatatgcaatgctggaaggtttagtgaagatgagGCCAGGTATTTCTTTCAGCAGCTGATCTCAGGTGTCCATTTCTGTCATACCATGCAAATATGCCACAGAGATCTGAAGCTAGAAAATACCCTTTTAGATGGAAGTCCTGCACCCCGCTTAAAAATTTGTGACTTTGGTTATTCGAAGTCATCTTTGCTCCACTCACGACCCAAATCAACTGTTGGAACGCCGGCGTATATAGCACCAGAGGTTCTTTCTAAGCGGGAGTATGATGGAAAGATGGCTGATGTATGGTCATGTGGGGTGACTCTGTATGTCATGCTGGTCGGAGCATATCCCTTCGAAGACCAGGATGACCCTAAAAATTTTAGGAAAACAATTCAGCGGATAATGGCCATTCAATACAAAATTCCTGATTATGTTCACATATCTCAAGATTGCAGACACCTTATCTCTCGTATTTTTGTTGCAAATCCATTGAGGAGAACTACTATTAAGGAAATCAAGAACCACCCATGGTTTTTAAAGAATCTTCCAAGGGAGCTAACAGAAGCAGCTCAAGCTATGTATTACCAGAGAGAAAATCCAAGCTTTCATCTACAAAGTGTGGACGACGTGATGAAAATTGTGGGAGAGGCAAGAAACCCACCTCCAGTATCCAGACCTGTCAGAGGCTTTGGCTGGgaaggagaagaagatgaagctgcagaagatttggaagcagaattggaggtggaggaagaggaggacgaagaagacgaGTACGATAAGAGGGTCAAAGAGGTTCATGCAAGTGGTGAATTCCAAATTAGTTAA 1074 0.3324 MDKYEAVKDLGSGNFGVARLMRNKVTKELVAMKYIERGHKIDENVAREIMNHRSLRHPNIIRFKEVILTPTHLAIVMEYAAGGELFERICNAGRFSEDEARYFFQQLISGVHFCHTMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSKREYDGKMADVWSCGVTLYVMLVGAYPFEDQDDPKNFRKTIQRIMAIQYKIPDYVHISQDCRHLISRIFVANPLRRTTIKEIKNHPWFLKNLPRELTEAAQAMYYQRENPSFHLQSVDDVMKIVGEARNPPPVSRPVRGFGWEGEEDEAAEDLEAELEVEEEEDEEDEYDKRVKEVHASGEFQIS 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02562 357 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Car05g02562 357 Coils Coil 315 351 - -
Car05g02562 357 MobiDBLite consensus disorder prediction 317 341 - -
Car05g02562 357 SMART serkin_6 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g02562 357 MobiDBLite consensus disorder prediction 306 357 - -
Car05g02562 357 Pfam Protein kinase domain 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g02562 357 PANTHER SERINE/THREONINE-PROTEIN KINASE SRK2A-RELATED 2 351 - -
Car05g02562 357 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Car05g02562 357 PANTHER SERINE/THREONINE KINASE 2 351 - -
Car05g02562 357 Gene3D Transferase(Phosphotransferase) domain 1 80 268 - -
Car05g02562 357 SUPERFAMILY Protein kinase-like (PK-like) 1 297 IPR011009 -
Car05g02562 357 CDD STKc_SnRK2 3 259 - -
Car05g02562 357 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Car05g02562 357 ProSiteProfiles Protein kinase domain profile. 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02562 Car-Chr5 70689890 70693586 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02562 3 263 CBL-interacting serine-threonine protein kinases AT2G26980 42.279 8.15e-67 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Car05g02562 Pkinase 7.9e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02562 K14498 - gmx:547811 639.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00632 06 6365398 6369224 Car05g02562 05 70689890 70693586 PCT