Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02556 ATGGCCGCAGAAATTTGTGGCGGGACTCTATCCTTATCCGTTAAAACTGAATTGCAACGCCAACGGTTATTCCTCCATTCTCAACGAACAACCACCACCAGATTCCACTCATCCAAACCTCGTTTTTCTTTTCGCTCTTCAAATGCCTCCACCTTTCGCCGTCGCTGCTCCTCCGTCTTCTGCCGTGTCGCTACCGATACAGTCTCCGACTTCGATTCCGTCTCCAAAGCAGGCCAGGATCGTCTCTCTAAGGTGCCGGTATCTAATATAAGGAACTTCTCAATCATTGCTCATATTGACCATGGCAAATCCACGTTAGCGGACAAATTGCTTCAGGTTACTGGCACCGTGCCACAGCGAGAAATGAAGGAACAATTTCTCGATAACATGGATTTAGAGAGAGAAAGAGGCATCACTATTAAGCTCCAGGCAGCTCGAATGCGTTATGTGTTTGAAAATGTGCCATATTGCTTAAATTTAATAGATACACCGGGACACGTTGACTTCTCATACGAGGTTTCTCGATCACTTGCTGCATGTGAAGGTGCTCTCCTTGTAGTAGATGCTTCTCAGGGTGTTGAAGCACAAACATTGGCTAATGTTTATTTAGCTCTGGAGAACAACCTAGAAATTATCCCTGTTTTGAACAAAATAGATCTTCCAGGTGCAGATCCAGAGCGAGTTATCAAGGAGATTGAAGAGGTTGTAGGTCTAGATTGTAGCAGTGCCATTCTCTGCTCTGCAAAGGAAGGAATAGGTATAATGGATATTCTCAATGCAATTGTTGCAAGAATTCCCCCACCTGCTGATACATCAAAAAGGCCATTGAGGGCTTTAATATTTGATAGTTACTACGATCCATATAGAGGTGTTATTGTATACTTTCGAGTTGTAGATGGCACTATAAAGAAAGGTGACAGAGTTTATTTTATGGCTAGTGGTAAGGATTATTTTGCTGATGAAATTGGAGTTTTGTCTCCCAATCAACTTCAAGCTGAAGAATTGTATGCTGGTGAGGTGGGCTATCTATCTGCATCGATAAGAACAGTAGCTGATGCCAGAGTGGGTGATACAATCACTCACTATACTAGAAAGGCAGACAATTCACTCCCTGGATACGAGGAAGCCACTCCTATGGTGTTCTGTGGCCTGTTTCCTGTTGATGCTGACCAATTTCCTGATCTACGAGATGCACTTGAGAAGCTTCAACTCAATGATGCTGCACTGAAGTTTGAACCTGAGACCTCAAGTGCTATGGGATTTGGCTTTAGATGTGGGTTTCTGGGTCTTCTCCACATGGAAATTGTTCAGGAGAGACTTGAGAGAGAATACAATTTGAGCCTGATAACTACTGCTCCAAGTGTTGTATACAGAGTGAACTGTGTTAATGGTGATACTGTTGAATGCTCAAACCCATCTTTACTTCCTGAGCCTGGAAAAAGGAAATCAATTGAGGAGCCAGTTGTTAAGATTGAGATGCTTACGCCAAAGGACTATATTGGTCCACTTATGGAACTGGCTCAAGATAGAAGAGGGCAGTTCAAAGAAATGAAATTTATCACTGAAATTAGGGCGTCGATCACCTATGAATTACCACTTGCTGAGATGGTTGGTGATTTCTTTGACCAGTTGAAGTCAAGAAGTAAGGGTTACGCCAGCATGGAGTATACCTTTATCGGTTACAAAGAAAGTGATTTAATTAAACTCGACATACAGATAAATGGTGAATGTGTGGAGCCATTGTCAACGATTGTGCACAAAGATAAGGCATATTCTGTGGGAAGAGCTTTAACTCTAAAGTTGAAGGAGCTTATACCACGGCAGATGTTTAAAATACCAATTCAAGCTTGCATGGGAGCTAAAGTGATTGCTAGTGAATCTTTATCTGCTATTAGGAAAGATGTATTAGCCAAATGCTACGGTGGGGACATAACGAGGAAAAAGAAATTGCTTAAGAAACAGGCCGAAGGAAAGAAAAGAATGAAATCTATTGGTAAAGTTGATGTGCCTCAAGAAGCCTTTATGGCAGTTTTGAAACTTGAAAAGGAGGTAATCTGA 2058 0.4198 MAAEICGGTLSLSVKTELQRQRLFLHSQRTTTTRFHSSKPRFSFRSSNASTFRRRCSSVFCRVATDTVSDFDSVSKAGQDRLSKVPVSNIRNFSIIAHIDHGKSTLADKLLQVTGTVPQREMKEQFLDNMDLERERGITIKLQAARMRYVFENVPYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVLNKIDLPGADPERVIKEIEEVVGLDCSSAILCSAKEGIGIMDILNAIVARIPPPADTSKRPLRALIFDSYYDPYRGVIVYFRVVDGTIKKGDRVYFMASGKDYFADEIGVLSPNQLQAEELYAGEVGYLSASIRTVADARVGDTITHYTRKADNSLPGYEEATPMVFCGLFPVDADQFPDLRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTVECSNPSLLPEPGKRKSIEEPVVKIEMLTPKDYIGPLMELAQDRRGQFKEMKFITEIRASITYELPLAEMVGDFFDQLKSRSKGYASMEYTFIGYKESDLIKLDIQINGECVEPLSTIVHKDKAYSVGRALTLKLKELIPRQMFKIPIQACMGAKVIASESLSAIRKDVLAKCYGGDITRKKKLLKKQAEGKKRMKSIGKVDVPQEAFMAVLKLEKEVI 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02556 685 TIGRFAM lepA: elongation factor 4 89 680 IPR006297 GO:0005525
Car05g02556 685 Pfam Elongation factor Tu domain 2 290 360 IPR004161 GO:0005525
Car05g02556 685 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 88 290 IPR027417 -
Car05g02556 685 Pfam GTP-binding protein LepA C-terminus 573 679 IPR013842 -
Car05g02556 685 PANTHER TRANSLATION FACTOR GUF1, MITOCHONDRIAL 78 679 - -
Car05g02556 685 Gene3D Translation factors 271 370 - -
Car05g02556 685 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 88 269 IPR000795 GO:0003924|GO:0005525
Car05g02556 685 PANTHER TRANSLATION FACTOR GUF1-RELATED 78 679 IPR006297 GO:0005525
Car05g02556 685 PRINTS GTP-binding elongation factor signature 92 105 IPR000795 GO:0003924|GO:0005525
Car05g02556 685 PRINTS GTP-binding elongation factor signature 135 143 IPR000795 GO:0003924|GO:0005525
Car05g02556 685 PRINTS GTP-binding elongation factor signature 159 169 IPR000795 GO:0003924|GO:0005525
Car05g02556 685 PRINTS GTP-binding elongation factor signature 175 186 IPR000795 GO:0003924|GO:0005525
Car05g02556 685 PRINTS GTP-binding elongation factor signature 211 220 IPR000795 GO:0003924|GO:0005525
Car05g02556 685 Hamap Translation factor GUF1 homolog, organellar chromatophore [lepA]. 82 682 IPR027518 -
Car05g02556 685 Gene3D - 87 270 IPR027417 -
Car05g02556 685 SUPERFAMILY EF-G C-terminal domain-like 377 455 IPR035647 -
Car05g02556 685 CDD lepA_C 486 565 IPR035654 -
Car05g02556 685 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 128 143 IPR031157 -
Car05g02556 685 SUPERFAMILY EF-G C-terminal domain-like 484 578 IPR035647 -
Car05g02556 685 SMART EFG_C_a 483 571 IPR000640 -
Car05g02556 685 TIGRFAM small_GTP: small GTP-binding protein domain 91 259 IPR005225 GO:0005525
Car05g02556 685 Gene3D Elongation Factor G (Translational Gtpase), domain 3 371 452 - -
Car05g02556 685 CDD LepA 91 268 - -
Car05g02556 685 Pfam Elongation factor G C-terminus 484 569 IPR000640 -
Car05g02556 685 Gene3D - 453 564 - -
Car05g02556 685 CDD EF4_II 276 361 - -
Car05g02556 685 CDD EF4_III 378 453 - -
Car05g02556 685 Pfam Elongation factor Tu GTP binding domain 89 266 IPR000795 GO:0003924|GO:0005525
Car05g02556 685 SUPERFAMILY Translation proteins 250 372 IPR009000 -
Car05g02556 685 Gene3D - 565 639 IPR038363 -
Car05g02556 685 Hamap Elongation factor 4 [lepA]. 85 683 IPR006297 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02556 Car-Chr5 70640691 70650876 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02556 90 323 Eukaryotic Initiation Factors Gene Family AT3G22980 33.198 2.82e-25 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02556 K21594 - gmx:100784073 1189.1