Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02550 ATGCAAGAAGATAAGAAAATGAAAGTGAAAAAGGGTTGGCTTGCTGTTCAAGTGGGTTTagaagaagaagaagaagGTGGTTCCATTTCTCAAAAATTCGTAATCCCTATCTCTTATCTTTACCATCCTCTTTTCAAGCGTCTTCTCGACAAAGCTTACGATGTTTATGGTTACCACACCGACGGTCCTCTCAAACTTCCATGTTCTGTTGATGATTTCCTTCATCTACGTTGGATAATCGAAAAAGAATCTGGTTCTAATCAACACAACCATAACAATAATCAACATCGCCTTCCTCATGCTATCATATTTCACTCTTGTTGA 324 0.3611 MQEDKKMKVKKGWLAVQVGLEEEEEGGSISQKFVIPISYLYHPLFKRLLDKAYDVYGYHTDGPLKLPCSVDDFLHLRWIIEKESGSNQHNHNNNQHRLPHAIIFHSC 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02550 107 Pfam Auxin responsive protein 6 79 IPR003676 GO:0009733
Car05g02550 107 PANTHER SMALL AUXIN-UP RNA-RELATED 7 94 - -
Car05g02550 107 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 7 94 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02550 Car-Chr5 70589283 70589897 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02550 9 81 Calmodulin-binding Proteins AT3G43120 43.836 1.01e-12 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02550 K14488 - mtr:MTR_3g097120 184.496