Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02525 ATGACACTGAAACGTACTAGTAAGCCGACTCAAACCCTTCTAAATTCTAATGCAGTTCCGTTTGAGCGCCAAAAAGCGAGTGAAACCAAGTCTCAGAAGAACTTTCTAGAAATGTCTGGAACTGGAAAGGGTAAGAAGAGGGAGGAACACGACAACGCTTCCGATGGCGACTCTGAAGCTCACGCGCCTCCCAAAAAGACCCTAAAAAAAGATTCCGACGATAACTCTGACGAAATCGTTGTTTGTGAGATAGGGAAGAACAGGAAAGTTACTGTGAGGATCTGGCAGGGTAAGATTTGGGTTGACATTCGTGAATTTTACATCAAAGATGGCAAGCAGTTGCCTGGCAAAAAAGGTATTTCACTGTCCATGGATCAGTGGAATGTACTTCGCAATCACATTGAAGAAATTGACAACGCACTCAGTGAGAACTCTTAG 438 0.4384 MTLKRTSKPTQTLLNSNAVPFERQKASETKSQKNFLEMSGTGKGKKREEHDNASDGDSEAHAPPKKTLKKDSDDNSDEIVVCEIGKNRKVTVRIWQGKIWVDIREFYIKDGKQLPGKKGISLSMDQWNVLRNHIEEIDNALSENS 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02525 145 Gene3D Transcriptional Coactivator Pc4; Chain A 69 145 IPR009044 GO:0003677|GO:0006355
Car05g02525 145 MobiDBLite consensus disorder prediction 40 77 - -
Car05g02525 145 Pfam Transcriptional Coactivator p15 (PC4) 82 133 IPR003173 GO:0003677|GO:0006355
Car05g02525 145 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 43 143 IPR045125 GO:0003713|GO:0060261
Car05g02525 145 MobiDBLite consensus disorder prediction 1 38 - -
Car05g02525 145 SUPERFAMILY ssDNA-binding transcriptional regulator domain 81 142 IPR009044 GO:0003677|GO:0006355
Car05g02525 145 MobiDBLite consensus disorder prediction 1 77 - -
Car05g02525 145 PANTHER BNAC09G47220D PROTEIN 43 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02525 Car-Chr5 70345781 70347859 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Car05g02525 PC4 5.9e-23 CL0609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02525 K25815 - gmx:100820368 163.31