Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02520 ATGAAGTTAGTCGGCGACGGTGCCGGTGGCCGTAAAGTGTTAGTCGGAGTGAAGTTAGATCCTCGTAGTCGGGAATTGTTGACGTGGGCACTCGTTAAGGTTGCTGAGCCCGGCGACCTTGTTATCGCGCTTCACGTTCTCGATACTGTCACTGAGGGAACATCGTCGTTGTTATCTCTGGTCAAAACTTTCGATTCAGTTCTCGCAGTATACGAAGGTTTCTGCAATTTAAAGCAGGTTGACCTTAGGTTGAAAGTGTGTAGAGGTGGTTCGGTTAGGAAGCTTCTAGTACAAGAGGCGAAAGCTTTTGGCGTTTCAACGGTGATTTTGGGAACTTCGAAAACTCATCACACAATCCGTTCGTCGGTGCGGGTTGCAAAGTATTGCGCAAAGAAATTGCATAAGTGTGTTTCAGTTTTCGCTGTTGATAATGGCAAAATTGCATTCCATAGAGAAGCTAGTCATCAAGAAAACTTACAGGAAGACCCGAATTTATTGTCAACATCATTGGTGGTTCGTACAAATAAAAGTGTGAAGAATTGTGGGAGTTGTTCTCTGCATGAGATTTCTGAAACTGGATTTAACGAGGAGGGGTTTCCTGATGATTATGAATCAGAAAACTCGCTTGCTTTGGTTCCCTTTCAAAAGCTTGATGATGATTCTTGTAGGTCAACCATGGTGGGTAATTCAAAACACATAAAACCTGGTTGGTCACTTATTCGCCATGTATTTCAGTCCAAAAAGCATTCCACCAAGTCTTTGCCGAAAAACACATTTGTTTTTCAACGAGCATTACGACAATGCAGCAGTCAATCTTCAGCTGTAGTCTACCCAGATCATAAACAAATCAATTTTGACCAAACTTATAATTCAACCCTAGATGGGGAGAGTGCTGCCATCGTGCCATTTGGATCTGCTATTATCTTACCTCCTCCCACCCTTTGCAGTGATGTTGGTAGCCTTGCCGAAGATTTGTTAGTCTTACGAGAGAAGTACTCACCTTCTTGTAGATTGTATAATTTGCAGGAACTTGTAGCTGCAACTGTGAACTTCTCATCCGAAAATTTGGTTGGCAAAGGTGGTAGTAGTGTTGTTTACAGAGGATGCCTTCCCGAAGGAAAGGAATTGGCTGTGAAAATTTTGAAGCCGTCAGAGAATGTCCTAAAAGAGTTTGCTCAGGAAATTGAGATTGTTACAACTTTGCATCACAAGAGCATAATATCTCTATCTGGTTTTTGTTTAGAGGGAAACCATATATTACTGGTTTATGATTTTTTATCAAGGGGAAGCCTAGAAGAAAACCTTCACGGTAATAAAAAGGACTATAATGCATTTGGTTGGCAAGAGAGGTACCAGGTCGCCGTGGGTGTAGCTGAGGCCTTGGATTATCTGCATAATGGCTGCGCACGAGCTGTAATCCATAGGGATGTCAAATCTTCTAATATCCTTCTTTCAGATGATTTTGAGGCTCAGCTCTCAGATTTCGGACTGGCTTGTTGGGGTTCTTCTTCTTCCCATATTATTTGTACTGATGTGGCCGGAACTTTTGGGTACCTAGCTCCTGAGTATTTTATGCACGGTAGAGTAACTGACAAAATTGATGTATATGCTTTTGGTGTTGTACTCCTTGAGCTGCTATCCAATAGGAAGCCCATTAACAATGAATGTCCAAAGGGCCAAGAGAGCCTTGTTATGTGGGCAACATCAATCTTGAAAAGTGGGAAAATTTTCCAGTTGCTTGACCCAAGCCTTGGCAGTGAATACAACCATTGCCAGATCAAGAGAATGGTTCTGGCTGCTACTCTCTGTATTAGACGAGTTCCGAGATCGCGGCCTCAAATCAGTCTTGTAAGTCCTTTGCCTGCGCAAATTGATTCCATTCAATCTGTCCCATCCATTGTGTTCTTTTGGATATCGATTATGTTTCTTCAATAA 1935 0.4238 MKLVGDGAGGRKVLVGVKLDPRSRELLTWALVKVAEPGDLVIALHVLDTVTEGTSSLLSLVKTFDSVLAVYEGFCNLKQVDLRLKVCRGGSVRKLLVQEAKAFGVSTVILGTSKTHHTIRSSVRVAKYCAKKLHKCVSVFAVDNGKIAFHREASHQENLQEDPNLLSTSLVVRTNKSVKNCGSCSLHEISETGFNEEGFPDDYESENSLALVPFQKLDDDSCRSTMVGNSKHIKPGWSLIRHVFQSKKHSTKSLPKNTFVFQRALRQCSSQSSAVVYPDHKQINFDQTYNSTLDGESAAIVPFGSAIILPPPTLCSDVGSLAEDLLVLREKYSPSCRLYNLQELVAATVNFSSENLVGKGGSSVVYRGCLPEGKELAVKILKPSENVLKEFAQEIEIVTTLHHKSIISLSGFCLEGNHILLVYDFLSRGSLEENLHGNKKDYNAFGWQERYQVAVGVAEALDYLHNGCARAVIHRDVKSSNILLSDDFEAQLSDFGLACWGSSSSHIICTDVAGTFGYLAPEYFMHGRVTDKIDVYAFGVVLLELLSNRKPINNECPKGQESLVMWATSILKSGKIFQLLDPSLGSEYNHCQIKRMVLAATLCIRRVPRSRPQISLVSPLPAQIDSIQSVPSIVFFWISIMFLQ 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02520 644 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 11 116 - -
Car05g02520 644 CDD USP_Like 12 137 - -
Car05g02520 644 Pfam Protein kinase domain 353 562 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g02520 644 SUPERFAMILY Protein kinase-like (PK-like) 332 619 IPR011009 -
Car05g02520 644 SMART serkin_6 351 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g02520 644 Gene3D HUPs 10 143 IPR014729 -
Car05g02520 644 Gene3D Phosphorylase Kinase; domain 1 323 425 - -
Car05g02520 644 ProSiteProfiles Protein kinase domain profile. 351 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g02520 644 Pfam Universal stress protein family 11 137 IPR006016 -
Car05g02520 644 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 7 617 - -
Car05g02520 644 PANTHER OS01G0253100 PROTEIN 7 617 IPR045271 GO:0004714|GO:0006468
Car05g02520 644 ProSitePatterns Protein kinases ATP-binding region signature. 357 379 IPR017441 GO:0005524
Car05g02520 644 ProSitePatterns Serine/Threonine protein kinases active-site signature. 472 484 IPR008271 GO:0004672|GO:0006468
Car05g02520 644 Gene3D Transferase(Phosphotransferase) domain 1 426 629 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02520 Car-Chr5 70285539 70289622 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02520 338 617 Trihelix Transcription Factor Family AT1G68690 44.211 2.40e-74 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Car05g02520 Pkinase 9.5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02520 - - gmx:100815722 966.452
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02520 05 70285539 70289622 Car05g02520 05 70285539 70289622 ECH