Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02510 ATGAAGAAACAATGGTGTGAGATTGAGGCAATAGGCATCAACTACAAGATCCAAACACATACAAAAAACCAACCTTTTAAAATCTTCACCAAACCTTCAAAACCAGAAGATGAATCAGAAGCTGAACAAAGGCTAGGTGATGGAGTTAAGCATGTCCTGAAGGAGGTTAATTGCATAGCCAAACCTTGCGAAATTCTTGCGATTGTTGGGCCAAGTGGAGCTGGAAAAtcatcacttcttgagatacttgctggtagagttagtccacaaagtgAAGGCTATATCTTGGTGAACAATGAGCATGTAGATAAAGCTAAGTTCAAGAAGATATCAGGGTATGTAACACAAAAAGATACCCTTTTCCCTTTACTTACAGTTGAAGAAACCATGATGTTTAGTGCAAAACTTAGGCTAAATCTTCCTCAACAGCAACTATGTTCTAAGGTTAAGTCACTGATTCAAGAGCTTGGTCTTAGCCATGTTGCTACGACTCGAGTAGGAGACGAAAAGGTCCGAGGAATATCCGGTGGCGAGAGGCGTCGAGTTTCCATTGGTGTTGAAGTGATACATGATCCAAAAGTGTTGATTCTTGATGAAGCAACTTCAGGTCTTGATAGTACATCAGCTTTGCAAATAATTGATATGCTTAAAGTAATGGCTGAATCTAAGGGAAGAACTATAATACTAAGTATTCATCAACCCGGGTTTCGGATAGTGAAGTTGTTCAATTCAATACTTTTGTTAGCTAATGGCAGTGTGTTACATCATGGCAGTGTGGATTTGTTGAGTGTTAATTTGAGGTTGATGGGTTTAGAGCTTCCACTTCATGTTAATGTTGTTGAGTTTGCTATTGAATCCATTGAGACCATTCAACAACAACAAAAGAATCAGCAAGGTCAGGTAGAAGCACCAAAACGATTATTACTAGGGACAATGATGACAGTAAAGAAAGGCGATGATCAAGGCGAAAGTAGAAGTGGTAAGTTTACTCTACAACAGCTATTTCAACAATCCAAAGTATTTGACATAGAAATCATCAATGTAGGAATGGATTTCACTTGTGATTTTGCTAATTCTAGATTGGGAGAAACTATGATTCTTGCTCATAGATTCTCCAAAAACATTATTCGTACAAAGGAGCTCTTTGCATTTAGGACAATTCAGATGCTGATTTCAGGGCTGGTTTTAGGATCCATCTTTTGTAATATCAAAGATGGTCTAGTTGGAGCAGAACAAAGGGTTGGTCTATTTGCTTTCATATTAACTTTTTTGTTATCAAGTTCCATTGATGCTCTACCGATTTTTCTGCAAGAAAGGGAGATTCTCATGAAGGAGACTTCAAGTGGAAGCTACAGAGTTTCATCCTATGCTATTGCAAATGGCCTAGTTTACTTGCCATTTCTACTCATACTAGCCATTTTATTTGCAGTGCCGCTATACTGGCTTATCGGTCTCAACACAAATTTCACGGCGTTTCTGCACTTCTTGTTGTTAATATGGCTGATTTTGTATACCGCGAATTCGGTAGTGGTGTGTTTCAGTGCTCTGGTGCCTAATTTCATTGTTGGAAATTCATTAATCGCTGGTGTCATTGGTTCGTCTTTCTTGTTCTCTGGTTACTTCATATCCAAAAATGAAACTCCAAACTACTGGATTTTCATGCATTATTTATCTCTATTTAAGTATCCGTTTGAAGGGTTTCTGATAAATGAGTTCTCTAACTCAAAGAAATGCTTGGAGTACATGTTTGGAGCATGTGTTATGAGGGGAGAGGATCTACTTAAAGAAGAAGGGTATGGAGGAGAGAGTAGTAGATGGAAGAATGTTGGTGTGATGGTGTGTTTTATCTTTGTTTATAGATTCATTTCTTATGTAATTCTTAGATACAGATGCTCCCAGAGTGTTACCTTCTGA 1914 0.3715 MKKQWCEIEAIGINYKIQTHTKNQPFKIFTKPSKPEDESEAEQRLGDGVKHVLKEVNCIAKPCEILAIVGPSGAGKSSLLEILAGRVSPQSEGYILVNNEHVDKAKFKKISGYVTQKDTLFPLLTVEETMMFSAKLRLNLPQQQLCSKVKSLIQELGLSHVATTRVGDEKVRGISGGERRRVSIGVEVIHDPKVLILDEATSGLDSTSALQIIDMLKVMAESKGRTIILSIHQPGFRIVKLFNSILLLANGSVLHHGSVDLLSVNLRLMGLELPLHVNVVEFAIESIETIQQQQKNQQGQVEAPKRLLLGTMMTVKKGDDQGESRSGKFTLQQLFQQSKVFDIEIINVGMDFTCDFANSRLGETMILAHRFSKNIIRTKELFAFRTIQMLISGLVLGSIFCNIKDGLVGAEQRVGLFAFILTFLLSSSIDALPIFLQEREILMKETSSGSYRVSSYAIANGLVYLPFLLILAILFAVPLYWLIGLNTNFTAFLHFLLLIWLILYTANSVVVCFSALVPNFIVGNSLIAGVIGSSFLFSGYFISKNETPNYWIFMHYLSLFKYPFEGFLINEFSNSKKCLEYMFGACVMRGEDLLKEEGYGGESSRWKNVGVMVCFIFVYRFISYVILRYRCSQSVTF 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02510 637 Pfam ABC-2 type transporter 232 317 IPR043926 GO:0140359
Car05g02510 637 ProSitePatterns ABC transporters family signature. 174 188 IPR017871 GO:0005524
Car05g02510 637 Gene3D - 40 309 IPR027417 -
Car05g02510 637 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 33 275 IPR003439 GO:0005524
Car05g02510 637 Pfam ABC-2 type transporter 364 572 IPR013525 GO:0016020|GO:0140359
Car05g02510 637 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 50 262 IPR027417 -
Car05g02510 637 SMART AAA_5 62 252 IPR003593 -
Car05g02510 637 PANTHER ABC TRANSPORTER G FAMILY MEMBER 5 1 629 - -
Car05g02510 637 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 1 629 - -
Car05g02510 637 Pfam ABC transporter 53 202 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02510 Car-Chr5 70176177 70178314 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02510 29 280 Calmodulin-binding Proteins AT2G36910 23.881 1.61e-15 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02510 K05681 - gmx:121172640 986.867