Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02503 ATGGGAAGATCAAAAAGTTGCAATAGAGGCCATTGGCAACCTGCTGAAGATCAAAAACTAAAACAACTTGTGAATCAATATGGTCCTCAAAACTGGAATTTCATTTCTCAACAACTAGAAGGAAGATCGGGGAAAAGTTGCAGATTAAGGTGGTATAATCAACTAAATCCAAACATAATTAAAAATCCATTTAGTGATGAGGAGGAAGATTTGTTGTTGTCACTTCACAAAGTGAAAGGAAACAAATGGGCAGCAATAGCTAGATATTTTCCAGGAAGAACTGATAATGCTGTCAAGAATCACTTTCATATATTAACTGCTAGAAGGAATAGAGAAAGATTCTCACTCTATGATGCTGATACAATACTTAGCTATGATAATTCAAGTAATAGTCATAATAATTTTAACTTAGGAAACTATGGTAAGAAAACAGGAACATTATTTGGTATGAGTTATTCCTCATCAAGTAACATAACATCATCAAGTTTTGATGCTTTTGGTGTTAATGCTAACTATAACAAGGCTGAAAAAGAATCAAAGGTTGTTTATAGTTCAATTCTTGGAAGTTATCATAGTTTCACTGCTCCAGGACTTCCATGTATTGGTAAGGTTGTTTCACTTCAACATAAGTTCATCTCAAACTCTATTAAAACAGGTAAGTATTCATGTGAGGAGCAAGAACAATCTGAAAAATGTGTTAATGATGTGAAGCAAAAGGGTGTTTCCTTCATAGACTTTCTTGGAGTAGGAAGttcttcttcttcttctgctCATGATGACACTATTGGTGGTGGACCATGA 801 0.3333 MGRSKSCNRGHWQPAEDQKLKQLVNQYGPQNWNFISQQLEGRSGKSCRLRWYNQLNPNIIKNPFSDEEEDLLLSLHKVKGNKWAAIARYFPGRTDNAVKNHFHILTARRNRERFSLYDADTILSYDNSSNSHNNFNLGNYGKKTGTLFGMSYSSSSNITSSSFDAFGVNANYNKAEKESKVVYSSILGSYHSFTAPGLPCIGKVVSLQHKFISNSIKTGKYSCEEQEQSEKCVNDVKQKGVSFIDFLGVGSSSSSSAHDDTIGGGP 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02503 266 ProSiteProfiles Myb-like domain profile. 4 55 IPR001005 -
Car05g02503 266 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 4 59 IPR017930 -
Car05g02503 266 SMART sant 8 57 IPR001005 -
Car05g02503 266 SMART sant 60 108 IPR001005 -
Car05g02503 266 PANTHER OS08G0435700 PROTEIN 2 251 - -
Car05g02503 266 CDD SANT 12 53 IPR001005 -
Car05g02503 266 CDD SANT 63 103 IPR001005 -
Car05g02503 266 PANTHER MYB PROTEIN-RELATED 2 251 - -
Car05g02503 266 SUPERFAMILY Homeodomain-like 8 102 IPR009057 -
Car05g02503 266 Gene3D - 62 133 - -
Car05g02503 266 Pfam Myb-like DNA-binding domain 12 69 - -
Car05g02503 266 Gene3D - 2 60 - -
Car05g02503 266 ProSiteProfiles Myb-like domain profile. 56 106 IPR001005 -
Car05g02503 266 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 110 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02503 Car-Chr5 70133492 70134406 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02503 3 253 MYB Transcription Factor Family AT4G33450 42.857 8.21e-64 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Car05g02503 Myb_DNA-bind_6 1.4e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02503 K09422 - thj:104804485 190.66