Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02500 ATGAATCTCACTTCTTTCAGTTTTCCATATCTTGTTGCTCCTCTATGCTCTACACTTTCCACCACTATTACTACTACTACAAGGTGCAAAAGCGTGAATAGTATTGCAATTGAAGGTCGTAATCTGAATTTCTCATTCACCGCAAGACAAACCAAAGATGTGCCGGTTCTTAGAGATTGCTCTATTCGAATTCCTTCTGGGCAATTTTGGATGCTTCTTGGACCAAATGGGTGTGGAAAATCAACACTCTTGAAGATTTTGGCTGGTCTTTTGACTCCAACTTCAGGAACAGTCTATGTGAAGGAACCTAAAAGTTTTGTTTTCCAAAATCCAGATCACCAGGTGGTGATGCCTACAGTAGATTCTGATGTTGCATTTGGTCTTGGTAAAATCAATTTGGCCGACGATGAAGTCAGATCTAGGGTGGCACAAGCTTTACATGCTGTTGGCCTATCTGACTACATGAAGAGATCTGTCCAAACTCTGAGTGGTGGTCAGAAGCAGAGGGTTGCCATTGCTGGGGCTCTAGCAGAAGCTTGTAAGGTTCTGTTGTTGGATGAGCTCACAACATTCCTAGATGAAACTGACCAGGTTGGAGTTATCAAAGCTGTAAGGAACTGTCTGGATACTTCTGAAGAAGTTACAGCATTATGGGTCACCCATCGTTTGGAAGAACTAAAGTATGCAGATGGTGCAATCTACATGGAGGATGGAAAGGTAGTCATGCATGGAGATGCGTCGAGCATAAGGACTTTCATTGAAGCCAGGCAATCTGCCTATATTAACCAGATTAATTCTTAA 801 0.4232 MNLTSFSFPYLVAPLCSTLSTTITTTTRCKSVNSIAIEGRNLNFSFTARQTKDVPVLRDCSIRIPSGQFWMLLGPNGCGKSTLLKILAGLLTPTSGTVYVKEPKSFVFQNPDHQVVMPTVDSDVAFGLGKINLADDEVRSRVAQALHAVGLSDYMKRSVQTLSGGQKQRVAIAGALAEACKVLLLDELTTFLDETDQVGVIKAVRNCLDTSEEVTALWVTHRLEELKYADGAIYMEDGKVVMHGDASSIRTFIEARQSAYINQINS 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02500 266 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 37 262 IPR003439 GO:0005524
Car05g02500 266 PANTHER ABC TRANSPORTER I FAMILY MEMBER 10 27 265 - -
Car05g02500 266 SMART AAA_5 66 229 IPR003593 -
Car05g02500 266 ProSitePatterns ABC transporters family signature. 162 176 IPR017871 GO:0005524
Car05g02500 266 Pfam ABC transporter 57 189 IPR003439 GO:0005524
Car05g02500 266 Gene3D - 32 265 IPR027417 -
Car05g02500 266 PANTHER ABC TRANSPORTER I FAMILY MEMBER 10 27 265 - -
Car05g02500 266 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 28 254 IPR027417 -
Car05g02500 266 CDD ABC_cobalt_CbiO_domain1 38 239 IPR015856 GO:0005524|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02500 Car-Chr5 70113622 70120011 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02500 37 249 Calmodulin-binding Proteins AT2G36910 30.736 2.95e-23 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02500 - - gmx:100813654 421.779