Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car05g02500 | ATGAATCTCACTTCTTTCAGTTTTCCATATCTTGTTGCTCCTCTATGCTCTACACTTTCCACCACTATTACTACTACTACAAGGTGCAAAAGCGTGAATAGTATTGCAATTGAAGGTCGTAATCTGAATTTCTCATTCACCGCAAGACAAACCAAAGATGTGCCGGTTCTTAGAGATTGCTCTATTCGAATTCCTTCTGGGCAATTTTGGATGCTTCTTGGACCAAATGGGTGTGGAAAATCAACACTCTTGAAGATTTTGGCTGGTCTTTTGACTCCAACTTCAGGAACAGTCTATGTGAAGGAACCTAAAAGTTTTGTTTTCCAAAATCCAGATCACCAGGTGGTGATGCCTACAGTAGATTCTGATGTTGCATTTGGTCTTGGTAAAATCAATTTGGCCGACGATGAAGTCAGATCTAGGGTGGCACAAGCTTTACATGCTGTTGGCCTATCTGACTACATGAAGAGATCTGTCCAAACTCTGAGTGGTGGTCAGAAGCAGAGGGTTGCCATTGCTGGGGCTCTAGCAGAAGCTTGTAAGGTTCTGTTGTTGGATGAGCTCACAACATTCCTAGATGAAACTGACCAGGTTGGAGTTATCAAAGCTGTAAGGAACTGTCTGGATACTTCTGAAGAAGTTACAGCATTATGGGTCACCCATCGTTTGGAAGAACTAAAGTATGCAGATGGTGCAATCTACATGGAGGATGGAAAGGTAGTCATGCATGGAGATGCGTCGAGCATAAGGACTTTCATTGAAGCCAGGCAATCTGCCTATATTAACCAGATTAATTCTTAA | 801 | 0.4232 | MNLTSFSFPYLVAPLCSTLSTTITTTTRCKSVNSIAIEGRNLNFSFTARQTKDVPVLRDCSIRIPSGQFWMLLGPNGCGKSTLLKILAGLLTPTSGTVYVKEPKSFVFQNPDHQVVMPTVDSDVAFGLGKINLADDEVRSRVAQALHAVGLSDYMKRSVQTLSGGQKQRVAIAGALAEACKVLLLDELTTFLDETDQVGVIKAVRNCLDTSEEVTALWVTHRLEELKYADGAIYMEDGKVVMHGDASSIRTFIEARQSAYINQINS | 266 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car05g02500 | 266 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 37 | 262 | IPR003439 | GO:0005524 | |
Car05g02500 | 266 | PANTHER | ABC TRANSPORTER I FAMILY MEMBER 10 | 27 | 265 | - | - | |
Car05g02500 | 266 | SMART | AAA_5 | 66 | 229 | IPR003593 | - | |
Car05g02500 | 266 | ProSitePatterns | ABC transporters family signature. | 162 | 176 | IPR017871 | GO:0005524 | |
Car05g02500 | 266 | Pfam | ABC transporter | 57 | 189 | IPR003439 | GO:0005524 | |
Car05g02500 | 266 | Gene3D | - | 32 | 265 | IPR027417 | - | |
Car05g02500 | 266 | PANTHER | ABC TRANSPORTER I FAMILY MEMBER 10 | 27 | 265 | - | - | |
Car05g02500 | 266 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 28 | 254 | IPR027417 | - | |
Car05g02500 | 266 | CDD | ABC_cobalt_CbiO_domain1 | 38 | 239 | IPR015856 | GO:0005524|GO:0016020|GO:0055085 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Car05g02500 | Car-Chr5 | 70113622 | 70120011 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Car05g02500 | 37 | 249 | Calmodulin-binding Proteins | AT2G36910 | 30.736 | 2.95e-23 | 97.1 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car05g02500 | - | - | gmx:100813654 | 421.779 |