Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02497 ATGCCCACGTGGTGGAGTAAAAAATCAATTAAGACCAAAGAACACCCACGTGGCGGCACAACCACCGCCGGCACCGTGCTTCACTTCAATTTCACCAAGTCTCCGATCAGAAACTCTACCAATACTAACAACGTCGAAAAACCTAAAAGCTTCGACGATGTTTCCGCTTTTAGAAATTCCCCCAGACCAAGCAGGGATTTCACTTCTTCTACCTCCGCCGCCGCCGGCTCTTCCTCTTGTTGTGATTCCGATGCCGGCGATAAGATAGGGATTCCTTTGCCTCGTCCTTCCGTTTATCCTACACAAAGCTTAAGCAACGATCAGGGTCTTACTTTCGGATCTACTTCCGTTTCTAGCTCTAGCGTTAGCTCCAATGGCTCTTACGACGATCCTTCAACTTGTAATTCTCAGATTAATAGCGCTAGAGGACAATGTGACACAAAGTTTAATGGGAGGCCTAGAAGCCCAGTTGGGTCAAGAAGGCCCACTAGCCCAACGTCGCCTCTTCATCCAAGGTTGCAAGTTTTGAGTCTTGACTCACCTACAGGTAGGCAAGAAGATGGAAGGAGTGAGTGTCATCCTTTGCCCCTTCCACCGGGATCTCCGACTAGTCCTTCTTCTCTTCCTAACATGAGAGGAAACGGACTGCTAGAAAACAGTACCGCTAACCGTTTCAAGTGGAAGCGAGGAAAGCTTCTCGGTCGGGGAACGTTTGGGCATGTTTACCTGGGATTCAATAGTGAAAGTGGACAATTGTGTGCAATAAAAGAAGTCAGGGCTGTCTGTGATGATCAAACCTCAAAAGAGTGCCTCAAACAACTTAGTCAGGAGATAAATTTGTTGAGTCAGCTTTCACATCAAAACATTGTTCAATACTATGGAAGTGATTTGGGAGAAGAAACACTTTCCGTTTATTTGGAATACGTCTCTGGAGGTTCTATTCATAAATTACTTCAGGACTATGGGGCCTTCAAGGAGCCTGTTATCCAAAATTATACCAGACAGATTGTCTCTGGACTTGCCTATCTTCACGGGAGAAATACAGTGCATAGGGATATTAAAGGGGCTAACATTCTAGTTGATCCTAATGGTGAAATCAAGCTGGCAGACTTTGGAATGGCTAAACATATAAATGCTTCTTCGTCAATGCTTTCTTTCAAAGGAAGTCCACACTGGATGGCACCAGAGGTTGTTATGAATACAAATGGCTATAGTCTTCCTGTTGATATTTGGAGCTTGGGATGCACAATTCTTGAAATGGCAACATCAAAGCCTCCTTGGAGTCAATATGAAGGGGTAGCTGCAATATTTAAAATTGGTAACAGCAAAGACATGCCTGAAATTCCTGATCATCTCTCAAATGATGCAAAGAATTTCATTAAGCTATGCTTGCATAGAGATCCTTCAACTCGCCCTACAGCCCAAATGCTACTAAATCACCCCTTTATTCGAGACCAGTCAGCTACAAAAGCTGCAAATGTCAGAATAACCAGGGATGCTTTTCCATATATGTTTGATGGAAGTCGGACGCCGCCAGTTTCAGATCTTCATTCCAATAGAACTTGTATTGCTTCACAGGATGGAGATTATGCAACAAAACCAGTTGTTACAGCTTCGCGAGCAGTTAGGAGTCCAAGAGACAACACAAGAATGATCACATCATTACCAGTATCTCCGTGTTCAAGTCCATTGCGACAGTACGTTCCCACACACAAGAGCTGTTTCCTATCTCCTCCCCATCCAACTTATACAATGATGGGACAAAATACACTCTCTTCATATGAATCATATCCACCAATGAGATCAAATGCCAAGTTTAGTCTTGATCCTTGGCAGGAAACACCTATGTACAAAGGCCACACACCTGGAGGATCCCCAAGAACGAGACTTTTTTGA 1896 0.4404 MPTWWSKKSIKTKEHPRGGTTTAGTVLHFNFTKSPIRNSTNTNNVEKPKSFDDVSAFRNSPRPSRDFTSSTSAAAGSSSCCDSDAGDKIGIPLPRPSVYPTQSLSNDQGLTFGSTSVSSSSVSSNGSYDDPSTCNSQINSARGQCDTKFNGRPRSPVGSRRPTSPTSPLHPRLQVLSLDSPTGRQEDGRSECHPLPLPPGSPTSPSSLPNMRGNGLLENSTANRFKWKRGKLLGRGTFGHVYLGFNSESGQLCAIKEVRAVCDDQTSKECLKQLSQEINLLSQLSHQNIVQYYGSDLGEETLSVYLEYVSGGSIHKLLQDYGAFKEPVIQNYTRQIVSGLAYLHGRNTVHRDIKGANILVDPNGEIKLADFGMAKHINASSSMLSFKGSPHWMAPEVVMNTNGYSLPVDIWSLGCTILEMATSKPPWSQYEGVAAIFKIGNSKDMPEIPDHLSNDAKNFIKLCLHRDPSTRPTAQMLLNHPFIRDQSATKAANVRITRDAFPYMFDGSRTPPVSDLHSNRTCIASQDGDYATKPVVTASRAVRSPRDNTRMITSLPVSPCSSPLRQYVPTHKSCFLSPPHPTYTMMGQNTLSSYESYPPMRSNAKFSLDPWQETPMYKGHTPGGSPRTRLF 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02497 631 Gene3D Transferase(Phosphotransferase) domain 1 225 503 - -
Car05g02497 631 MobiDBLite consensus disorder prediction 1 215 - -
Car05g02497 631 MobiDBLite consensus disorder prediction 611 631 - -
Car05g02497 631 SMART serkin_6 227 483 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g02497 631 MobiDBLite consensus disorder prediction 98 146 - -
Car05g02497 631 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 613 - -
Car05g02497 631 ProSiteProfiles Protein kinase domain profile. 227 483 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g02497 631 SUPERFAMILY Protein kinase-like (PK-like) 226 556 IPR011009 -
Car05g02497 631 MobiDBLite consensus disorder prediction 16 49 - -
Car05g02497 631 MobiDBLite consensus disorder prediction 61 79 - -
Car05g02497 631 Pfam Protein kinase domain 228 483 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g02497 631 ProSitePatterns Protein kinases ATP-binding region signature. 233 256 IPR017441 GO:0005524
Car05g02497 631 CDD STKc_MEKK1_plant 226 483 - -
Car05g02497 631 MobiDBLite consensus disorder prediction 157 183 - -
Car05g02497 631 PANTHER MAP KINASE KINASE KINASE 1 613 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02497 Car-Chr5 70103006 70108063 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02497 1 546 MAP Kinase Kinase Kinase AT1G53570 59.066 0.0 558
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Car05g02497 Pkinase 1.7e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02497 K04421 - gmx:100813122 903.279
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00686 06 6867230 6872141 Car05g02497 05 70103006 70108063 PCT
Car06g00517 06 5280076 5286778 Car05g02497 05 70103006 70108063 PCT